| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1538 |
|---|
| Symbol | |
|---|
| ID | 9245388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 1886825 |
|---|
| End bp | 1888096 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | glycoside hydrolase family 16 |
|---|
| Protein accession | YP_003679473 |
|---|
| Protein GI | 297560499 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCG CGCACCGGCC CCGCAGGTCC CTCGCCTCCG CGGCCCTGTC CTTCCTCACC
GCAGCCGCGC TCGTGATCCC GGTCGGGGCC GCCTCGGCCG CCCCCGTCCC CGAGGACACG
GCGGCCCCGG CGTCCGCCGA AGCCGCCCAG GCGGCGGCCC TGGTGTGGTC CGACGAGTTC
AACGGCGCCG CCGGAAGCGC CCCCAACCCC GCCAACTGGA ACCACGAGAC CGGCGCCCAC
GGCTGGGGCA ACAACGAACT CCAGAACTAC ACCAGCAGCC GCGCCAACTC CGCCCTCGAC
GGCAACGGCA ACCTCGTCAT CACCGCACGC AGGGGAGCCA ACGGCGGCTA CACCTCCGCC
CGCATGACCA CCCAGAACAA GGTCGAACAC GCCTACGGCC GCATCGAGGC CCGCATCAAG
ATCCCCCGCG GCCAGGGCAT CTGGCCCGCC TTCTGGATGC TCGGCGCCGA CTTCCCCGAC
ACCCCCTGGC CCGACTCCGG CGAGATCGAC ATCATGGAGA ACATCGGCCG CGAACCCCAC
CTGGTCCACG GCACCCTCCA CGGCCCCGGC TACTCCGGGG GCAACCCCCT GACCGGCTCC
TACATGCACC CGCAGGGCTG GTCCTTCGCC GACGACTTCC ACACCTTCGC CGTCGACTGG
AGCCCCGGCT CCATCACCTG GTCCGTGGAC GGCAACGCCT ACCAGACCTA CACCCCGGCC
GACACGCGCG GAAACCCCTG GGTCTACGAC CAGCCCTTCT TCATGATCCT CAACATCGCC
GTGGGCGGTA ACTGGCCCGG CTACCCCGAC GGCACCACCC AGTTCCCCCA GCAGATGCTC
GTGGACTACG TCCGGATCTA CTCGGACGGC GGCGGCCCCG GCGGCGGCAC CGGGACGATC
ACCGCCTCCA ACGGCATCTG CCTCGACGTC GCCGGGGCCC AGACGGGCGA CGGCACCCCG
ATCCAGCTGG CGCACTGCAA CGGCAACCAG GCCCAGCAGT GGACCGAGGG CTCCGACGGC
ACGTTCCGGG CGTTCAACAA GTGCCTGGAC GTGGCGGGCG GCGCCACCGC CGCGGGCACC
CCCGTACAGC TGTGGACCTG CAACGGGACC GGCGCGCAGC GGTGGACCCA CGACAGCGGG
ACGCAGGCCC TGCGCAACCC GCAGTCGGGC CGCTGCCTGC AACCCCAGGG CCGGGCGCAG
AGCGACGGCA CCCGGATGGT GATCGCCGAC TGCGACGGCA GCGCCGTCCA GCGCTGGAGC
CTGAACGGCT GA
|
|---|
| Protein sequence | MRIAHRPRRS LASAALSFLT AAALVIPVGA ASAAPVPEDT AAPASAEAAQ AAALVWSDEF
NGAAGSAPNP ANWNHETGAH GWGNNELQNY TSSRANSALD GNGNLVITAR RGANGGYTSA
RMTTQNKVEH AYGRIEARIK IPRGQGIWPA FWMLGADFPD TPWPDSGEID IMENIGREPH
LVHGTLHGPG YSGGNPLTGS YMHPQGWSFA DDFHTFAVDW SPGSITWSVD GNAYQTYTPA
DTRGNPWVYD QPFFMILNIA VGGNWPGYPD GTTQFPQQML VDYVRIYSDG GGPGGGTGTI
TASNGICLDV AGAQTGDGTP IQLAHCNGNQ AQQWTEGSDG TFRAFNKCLD VAGGATAAGT
PVQLWTCNGT GAQRWTHDSG TQALRNPQSG RCLQPQGRAQ SDGTRMVIAD CDGSAVQRWS
LNG
|
|---|
| |