Gene Ndas_1476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1476 
Symbol 
ID9245326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1808508 
End bp1809914 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content73% 
IMG OID 
Productprotein of unknown function DUF1212 
Protein accessionYP_003679413 
Protein GI297560439 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.783892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCCGA GCGAGGACCG CCTGCTCAGC AGGATGCGGG ACTGGCGCGA GGCGCACGAG 
CGGGAGCTGA CCCCGGACGG CTTCGACGAG ACCGAGGACG TCAACCTCCC CGACGCCCGC
GCCATCGACC TGGTGCTGCG GGTGGGCGAG CTGATGCTCG CCAGCGGAGA GGGCACGGAG
GCCGTCAGCG AGGCGATGCT CAGCCTCTCG GTCGCCTTCG ACCTGCCCCG CTCGGAGGTC
TCGGTCACCT TCACCACCAT CACCCTGTCC ACCCACCCCG GGGGCGAACA CCCCCCGATC
ACCGGCGAAC GGGTGGTGCG CCGCCGCACC CTGGACTACT TCCGCGTCAA CGAACTGCAC
ACCCTGGTGC AGCAGTGCGC GCTCGGCCTG CTGGAACTGG AGGACGCCGC CGCCCGCCTG
ACCCAGATCA GGCGCGCCCG CATGCCCTAC CCCAACTGGC TCATCGCGGT CGGGTTCGGC
CTCATCGCCT CCAGCGCGAG CCTCATGGTG GGCGGCGGCC TGATCGTGGC GACCGCGGCC
TTCCTGGCCA CCGTCATGGG CGACCGCACG TCGGTGTTCC TGGCCAAGCG GGGCGTCGCG
GAGTTCTACC AGATGGCGGG CGCCGCGGTG GTGGCCGCCA CGATCGGCGT GGCGCTGCTG
TGGGCCAGCA CCACGCTGGA CCTCGGCCTC CAGGCCGGGG CGATCATCAC CGGCAACATC
ATGGCCCTGC TGCCCGGACG CCCGCTGGTC TCCAGCCTCC AAGACGGCAT CAGCGGCACC
TACGTGTCGG CGGCGGCGCG CCTGCTGGAG ACCTTCTTCA TCCTGGGCGC GATCGTGTCC
GGCGTGGGCG CGGTCGCCTA CACCGCCCAG CGCCTGGGCG TGAACATCAA CCTGGAGGAC
CTCCCCTCCG CGGGAACCTC GATGGAGGTC CCCGTACTGA TCGGCGCGGC GGGGATCGCG
GTGGCCTTCG CGATCTCGCT CGCCGTACCG CCCCGGATGC TGCCGATGAT CGGCGTGCTC
GGCGTGATGA TCTGGGTGAT CTACGCGAGC ATGCGCGACC TGCTGCACGT GCCCGCGGTG
GTGGGCACGG TCGCGGGCGC GGTCGCGGTG GGCGTGGTGG GCCACTGGCT GGCGCGGCGC
ACGCGCAGAC CGGTGCTGCC CTACCTGGTC CCGTCGATCG CCCCGCTGCT GCCCGGCAGC
ATCCTGTACC GGGGCCTGAT CGAGATCACG CAGGGCGACC CCTCCGCCGG GCTGCTCAGC
CTCGCGGAGG CGGTCACGGT GGGCCTGGCG CTGGGCGCGG GGGTCAACCT CGGCGGCGAG
CTGGTCAGGG CCTTCCAGCA CGGCGGACTG GCCGGCGCGG GGATGCGCAG CCGCCCTGCG
GCGCGCCGGA CACGCGGCGG GTACTGA
 
Protein sequence
MPPSEDRLLS RMRDWREAHE RELTPDGFDE TEDVNLPDAR AIDLVLRVGE LMLASGEGTE 
AVSEAMLSLS VAFDLPRSEV SVTFTTITLS THPGGEHPPI TGERVVRRRT LDYFRVNELH
TLVQQCALGL LELEDAAARL TQIRRARMPY PNWLIAVGFG LIASSASLMV GGGLIVATAA
FLATVMGDRT SVFLAKRGVA EFYQMAGAAV VAATIGVALL WASTTLDLGL QAGAIITGNI
MALLPGRPLV SSLQDGISGT YVSAAARLLE TFFILGAIVS GVGAVAYTAQ RLGVNINLED
LPSAGTSMEV PVLIGAAGIA VAFAISLAVP PRMLPMIGVL GVMIWVIYAS MRDLLHVPAV
VGTVAGAVAV GVVGHWLARR TRRPVLPYLV PSIAPLLPGS ILYRGLIEIT QGDPSAGLLS
LAEAVTVGLA LGAGVNLGGE LVRAFQHGGL AGAGMRSRPA ARRTRGGY