Gene Ndas_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1270 
Symbol 
ID9245120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1575889 
End bp1577382 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003679215 
Protein GI297560241 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.404033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAT CCCAGGTCGG TCCACGTCTT TCCCCGTCAC GGGCTTTCTG GGCCCGTGCC 
GACGTCCTGC GGTCGCTGGC CGAGCACGAC GCCGGAGCCC TGTTCGGGCT CGTCCGACAG
CACACCGGCG CCAGCCAGCA GACGATCGGC TCCGCCGTCG ACATGGCCCA GCCACACGTG
AGTGCGATCA TGGCGGGAAG GCGCCTGGTC ACCGCGCTCA GCACGTGGCA GCGCATCGCC
GACGGCCTGG CCATGCCTTC CGAGGCCCGC CGGACCCTGG GCCTCGCTGA TTCGGGTGAC
GAGTATTCGA AGGGCGTTTC CTGGACAGAA TCCTCTCTGC AAGAAGGCGA TTTATGGTCC
GCGTCCAGAA CGGCGCAGGA CATCGTCGAC ATCACGCTGA AGGACCTGAT GAAACGCAGA
GACGCATTCG CGGTCGGCGG CGCGCTCCTG ATGGGCGCCG CGCTGACGGA GACGCTGGAA
CACTGGCTGC TGCCCGGCCC GGCCGCCCCC GGCCTGGTCC GCGGCACCAT CGGAGAGGCC
GAACTGGGGC GCATCGAGGC CGCCACCGTG GCGCTGCGGC ACTGGAACGA CCGGTGGCGC
CTGGGCGTGC GCCGCAAGGC CGTCGTCGGA CAGCTCTCGG AGGTGTCCGA ACTCGTGGAG
ACCCCCCAGC CCGCCTCCGT GCAGAACCGG CTGTTCGCGG TGATGGCCGA ACTGTCCAAG
ACCGTCGCCT CGATGTCCTT CGACGCCGGC GACCACCCCA CCGCGCAGCG GTACTACACC
CTCTCCCTGC GCGCGCTCCA CCAGGCCGGA CCCGAGCACC GCCCCTACGG CGTCGGGGTC
CTGGCCGACA TGGCCCGGCA GATGCTCGAC CTGCACCGGC CCGAGGACGC CCTGGACATC
TCCCGCCTCG CGCTCGACAG CGCGGACTCC ACCGGCGCGC CCGCGCTCGT CCGGGCGATG
CTGCGCACGC GCGAGGGCTG GTCCTACGCG CGGATGGGCA GGTCGGAGGC CTACCGCCGC
ACCGTCATCC AGGCCGAGGA CCTCCTGGAG GGCGCCAACG GCGAGGAGGT GCCCGACTGG
GTGGGCGGCT TCGACCACGC CGAGCTGGCC GGGGTGGTCG GCGCCCGCTA CCGCGACCTC
GCGGTGCTCC AGGAGGACCC GGGCGCGCGC CGCAGGCACG CCGAGTCCTC CGCCGCCTAC
ATCACCAAGG CGCTCCAGCT GCGCGCGCCC TCCGGCAAGC GCGGCCGCGC CTTCGACCTC
ATCGGGCTGG GCCGCACCTA CCTGCTGCTC GACGAGCCCG CCGAGGCCGC CCGGGTGGTG
CGCCAGGCCG CGGCCCTCGA ACCCTCCCTG GGTTCGGGCA GGGTCCGCAG ACGCCTGCGC
GACTGGTACA CCGAGTCCGC CACGCACCAC CGCGACCCGC ACGTGGCCGC GGTCCGCGAT
GAGTTATCAC ATACGCTGCT GCACCATCAG CGAAATGTGA AAGGGATGAC GTGA
 
Protein sequence
MTKSQVGPRL SPSRAFWARA DVLRSLAEHD AGALFGLVRQ HTGASQQTIG SAVDMAQPHV 
SAIMAGRRLV TALSTWQRIA DGLAMPSEAR RTLGLADSGD EYSKGVSWTE SSLQEGDLWS
ASRTAQDIVD ITLKDLMKRR DAFAVGGALL MGAALTETLE HWLLPGPAAP GLVRGTIGEA
ELGRIEAATV ALRHWNDRWR LGVRRKAVVG QLSEVSELVE TPQPASVQNR LFAVMAELSK
TVASMSFDAG DHPTAQRYYT LSLRALHQAG PEHRPYGVGV LADMARQMLD LHRPEDALDI
SRLALDSADS TGAPALVRAM LRTREGWSYA RMGRSEAYRR TVIQAEDLLE GANGEEVPDW
VGGFDHAELA GVVGARYRDL AVLQEDPGAR RRHAESSAAY ITKALQLRAP SGKRGRAFDL
IGLGRTYLLL DEPAEAARVV RQAAALEPSL GSGRVRRRLR DWYTESATHH RDPHVAAVRD
ELSHTLLHHQ RNVKGMT