Gene Ndas_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1254 
Symbol 
ID9245104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1557860 
End bp1558663 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content75% 
IMG OID 
Productprotein of unknown function DUF1295 
Protein accessionYP_003679199 
Protein GI297560225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.141355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTCT CCGCGCTCCC CCTCACCCTG GGGCTGTCCG CCCCGGCCGT GCTGGCGCTC 
ATGCTCGCGA CCTTCGCCCT CGCGCTGCGC CTGGGCAGGC ACAGCGTGGT GGACGCGGCC
TGGGGGCTCG GGTTCACCGC CGTGGCGGCG GTCGGCGTCC TGACCGCCTC GGGCGACCCC
GCCCGCTCCT GGCTGCTGGC CGGGCTCACC GCCGTGTGGG GGGTGCGCCT GGCCGTGCAC
ATCGGCCTGC GGAGCCGGGG CAGGGGCGAG GACCCCCGCT ACGAGCGCCT GCTGGACCGG
GCTCCCGGCA ACCGGAACGC CTACGCCCTG CGCGTGGTCT ACCTGCTCCA GGGGTTCCTG
GTGTGGCTCG TCGCCATGCC GGTCCAGGCG GCGGTGCACA CCGGGGCGCC CCTCCTCGGG
TCCCCTCAGG TGTGGCTTGC CGTCGCCGGT GCGGCCGTGT GGCTGCTGGG GTTCGTGTTC
GAGACGGTGG GAGACGCCCA GCTGGCCCGG TTCAGGCGCG ACCCCGCCAA CAGCGGGCGG
ATCATGGACC GCGGCCTGTG GGCGTGGACC CGCCACCCCA ACTACTTCGG CGACGCGTGC
GTGTGGTGGG GGCTGTTCCT GGTCGCGCTG TCGGGGTCGT GGTGGGTGCT GCTCACCCTG
CCCGCGCCCG TGGTGATGAC CTACCTGCTG ACCCGGGGTT CGGGCCAGCG GCTGCTGGAC
GAGCACATGG CCGGTCGTCC CGGGTGGGCG GAGTACGCCC GGCGCACGAG CGCGTTCGTG
CCGACGCCGC CCGGCCGGGG CTGA
 
Protein sequence
MDVSALPLTL GLSAPAVLAL MLATFALALR LGRHSVVDAA WGLGFTAVAA VGVLTASGDP 
ARSWLLAGLT AVWGVRLAVH IGLRSRGRGE DPRYERLLDR APGNRNAYAL RVVYLLQGFL
VWLVAMPVQA AVHTGAPLLG SPQVWLAVAG AAVWLLGFVF ETVGDAQLAR FRRDPANSGR
IMDRGLWAWT RHPNYFGDAC VWWGLFLVAL SGSWWVLLTL PAPVVMTYLL TRGSGQRLLD
EHMAGRPGWA EYARRTSAFV PTPPGRG