Gene Ndas_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1238 
Symbol 
ID9245088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp1539088 
End bp1540236 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content76% 
IMG OID 
Productmembrane protein 
Protein accessionYP_003679183 
Protein GI297560209 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.375166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0948074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCCCG AACCCGAGAA CCGTCCGGCC GCGACCGACC GGCGCTCCGT GCCCTCGCCG 
CGCCGCGCCC GCCAGGAGGA CTCCGGTCCC CGGCACGCCT GGGAGCGGCC GACCGGGGGC 
GGGCGCGCCC GCGGGCAGCG GCTGCCCGCG CTGGCCGCGC TCGTCCTGAT CGGGGTGCTG 
TGCGCGGTGG GCCTGGGCTA CCTGGCGGTG CGGTTCACCG GGCTGGTGCG CGTCTTCTTC 
TCCGAGGCGG CGCTGGCGGT GTTCCTGGGG CTGGTGACGC TGGCCTTCGG GTTCTGGGTA 
CTGCGCCGCA TCCGTCCGGT GCGCGACCCC GCCCTGGACG CCTCCGTGGT CGCGGTGCTC 
TGGGGTCTGA CCGCCGCGCC GGCGGGCGGG GTCGTCGCCA ACGCGGGCCT GGGCTCGATC 
TGGGCCAAAA GCCTGGGGCT GCCCTTCTCC GGGGTCTGGG GGGCGGCCAT GACCGCCCCC 
CTCAACGAGG AGGTGCTCAA GCTCGCCGGG ATCGTGCTGG TGGCGGTGGC CTTCCCCGCC 
GCCGTGCGCG GTCCGGTGGA CGGGTTCGTG ATCGGGTCCC TGGTGGGTCT GGGCTTCGAG 
GTGACGGAGA ACTTCGTCTA CTCGATGAAC GCGATCGTCC AGTCGGGCGG CACCGGCGGA 
CTGGTGCCGG TGGCGCAGAC GACCGTGGTG CGGCTGGTCC TGACGGGGTT GGGCTCGCAC 
TGGGCGATGT CGGCGGTCGC GGGCACCGCC GTGGGCCTGC TGGCGGCGGT GGCGTGGCGG 
CCCGGCAGTC ACAGGGCCGG GGCCGCCGCC CTGCTGGTGC TCCTGGCGAT GGCGCTGCAC 
TGGCTGCTGG ACTCGCCGCT GTTCGCCGGG GTCGGTGGTG TCGTGTTCAA GGTCGCGGCG 
GTCTTCCTGA CCACGATGGC CGTGTACTTC ACCGTCCGGC ACGCCTACCG GCGCCGGGTG 
CGCGCGACGC TGGCCTCCGA GGGCGGGGCT CTGGGCATGC GGCGGTCGGC GGCGGTGGCC 
CTGGCCAACC GGCGCGGCCG CGTCGGGGAG CTGAGCCGCG TGGCGGAACC GGAGCGGCCC 
GCCGTGGAGA GGCGTCAGGA GCAGATGCTG GCGATCGCCG AGGACCGGGC GGTGCGCCGG 
ACGCCGTGA
 
Protein sequence
MNPEPENRPA ATDRRSVPSP RRARQEDSGP RHAWERPTGG GRARGQRLPA LAALVLIGVL 
CAVGLGYLAV RFTGLVRVFF SEAALAVFLG LVTLAFGFWV LRRIRPVRDP ALDASVVAVL 
WGLTAAPAGG VVANAGLGSI WAKSLGLPFS GVWGAAMTAP LNEEVLKLAG IVLVAVAFPA 
AVRGPVDGFV IGSLVGLGFE VTENFVYSMN AIVQSGGTGG LVPVAQTTVV RLVLTGLGSH 
WAMSAVAGTA VGLLAAVAWR PGSHRAGAAA LLVLLAMALH WLLDSPLFAG VGGVVFKVAA 
VFLTTMAVYF TVRHAYRRRV RATLASEGGA LGMRRSAAVA LANRRGRVGE LSRVAEPERP 
AVERRQEQML AIAEDRAVRR TP