| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1225 |
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| Symbol | |
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| ID | 9245075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | + |
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| Start bp | 1526165 |
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| End bp | 1527058 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | Type II secretion system F domain protein |
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| Protein accession | YP_003679170 |
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| Protein GI | 297560196 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00467783 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTCCCA ACTTGGCCGC TGCTCTTGCG GGTGCCGCCA TCGGGCTGGC CCTGTGGGCA
CTTTTCGCCG CCCGCTGGGC ACGCCCGACA CTCGCTGAAC GCTTGGCCGC TCCGCCTCCT
CCCAGGCCTG TCATGGTCAC GGACCAGGAT GCCGGAGTAC TGATTCGCCT GGGAAAGATC
GGTGTTCCGA TCATGGAAGG CTTCGGTATG CCAGGGCGCC GCACCCGGCG AAACTTGATG
GTGTGCGAAC GCTCACCAGA GTCCTACCTC GCCGAGAAGT TCACTAGTCT GCTTCTGGGC
TTGGCCTTGC CACCGTTGTT GGGGAGCATA TTTGCCTTGG CCGGAATCCG GCCGTCCGCG
ACTGTCGCAG CGGTCGTGTG GGTGTTGTTC GTTCTTGGCA CCTGGTCCGC ACCCGATATG
TCCCTGCGGG ATGAAGCGAA TAAGCGTCGG GAACAAATGC GCCGTGCCTT GGCAAGCTTT
GCTGATCTGG TCGTAGTGTC TCTGGCCGGG GGAGCGGGCG TCAACGGTGC TCTCGCTGAC
GCCGGAGCGG CGGGCAACGG ATGGGCCATG GCCCGTATCC GGGAGAGCCT GCGCCAGGCA
ACGCTCATGC GCCAATCCCC TTGGACCGCG TTGCGCGACC TTGGTGAACG TTACGACACC
CCAGAGTTTG CCGAACTGGC GGCCAGTCTC CAGCTTGCCG GTGCTGACGG TGCCCGCATT
CGCAGTTCCC TGGCTGCCAA AGCTAAGACA CTGCGCACTC AGTTCCTTGC CGAAATGGAC
GCCGAGGCTC AGTCCGCCAC AGAGCGGATG AGCCTGCCGG TGATCCTGCT TTTTGCCGGG
TTCTTAGCTT TGCTGGGTTA TCCGGCAATG AGCAACATCA TGTTCAGCGC ATGA
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| Protein sequence | MTPNLAAALA GAAIGLALWA LFAARWARPT LAERLAAPPP PRPVMVTDQD AGVLIRLGKI
GVPIMEGFGM PGRRTRRNLM VCERSPESYL AEKFTSLLLG LALPPLLGSI FALAGIRPSA
TVAAVVWVLF VLGTWSAPDM SLRDEANKRR EQMRRALASF ADLVVVSLAG GAGVNGALAD
AGAAGNGWAM ARIRESLRQA TLMRQSPWTA LRDLGERYDT PEFAELAASL QLAGADGARI
RSSLAAKAKT LRTQFLAEMD AEAQSATERM SLPVILLFAG FLALLGYPAM SNIMFSA
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