Gene Ndas_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1175 
Symbol 
ID9245025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp1431003 
End bp1432112 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content77% 
IMG OID 
ProductPrephenate dehydrogenase 
Protein accessionYP_003679122 
Protein GI297560148 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.349516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGCA CCATGGCGGT GGTCGGCACG GGACTCATCG GAACGTCCGT GGCGCTGGCC 
GCGGGACGGC ACGGGGTCGC CGTCCACCTG ATGGACCGGG ACCCCGCCGC GGCCCGCACC 
GCCGCCGCGC TGGGCGCCGG AACGGTCGGC GCCCCGGCCG AGGCGGTGGA CCTGGCCGTG 
ATCGCGGTGC CGCCCAGCAT GGTCGGCGCC GTCCTGGCCG AGCAGCAGCT GCGCGGCCTG 
GCCCGGGCCT ACACGGACGT GGCCAGCGTG AAGTCCGCGC CCGGCCGGGA CGTGCTGAGC 
GCCATCGCGG ACCCGGCGAC GTTCATCGGC GGCCACCCCC TGGCCGGCCG GGAGCGGGCG 
GGTCCCCTCG CGGCCCGCGC GGACCTGTTC GAGGGCCGCA CCTGGGTTCT CACACCGACG 
GCGGCCACCG CGCGACCAGT GCTCAACCGG GCGCTGGAGA TGATCTGCCT GTGCGGCGCG 
GTCCCGGTGA TGATGGACAG CCAGGCCCAC GACGACGCGG TGGCGCTGAC CTCGCACGCA 
CCGCACGTGG TGGCGAGCCT CATGGCGGCG CGGTTGCGCG GCGGGGCCGA GGAGGCCTTC 
CGCCTGGCCG GGCAGGGGTT GCGCGACACC ACCCGCGTCG CGGGCGGCGA CCCCCGGCTG 
TGGACCGACA TCCTGCGCGC CAACTCCGGG CCGCTGGTCG GGGTGCTGCG CGACCTGCAC 
GAGGACCTGT CACTGGTGCT GGCCTCCCTG GACGTGCTCT CCCGCTCCGG TCCGGGGCAG 
GGCGCGCGCG AGACGGGCCG GGTGCGCGAC CTGCTGGACC GGGGTTCCCA GGGCCTGGGA 
CTGCTCCGCG AGCAGCCGCC GGGCGGGGCG CGTCTGCGGG TGGCGGTGGA GGAGGCCCCC 
GGAGAGCTGG CACGGCTGCT GGCGGTGCTG GACGAGTCCG GCGTCACCGC CGACGACGTG 
TCCGCCTCCT GGGACCAGGA CACCCTGACG GCGGAGTTCG CGGCACCGGC CACCGCCGCC 
GGGCCGCTGC TGAGGCGGCT GGGGGCGGAG GGCTGGACGG CCGGGTACGC GGACCTGGCG 
ACGGACTCCG AGGTCGGCGC CCTGCGCTGA
 
Protein sequence
MIRTMAVVGT GLIGTSVALA AGRHGVAVHL MDRDPAAART AAALGAGTVG APAEAVDLAV 
IAVPPSMVGA VLAEQQLRGL ARAYTDVASV KSAPGRDVLS AIADPATFIG GHPLAGRERA 
GPLAARADLF EGRTWVLTPT AATARPVLNR ALEMICLCGA VPVMMDSQAH DDAVALTSHA 
PHVVASLMAA RLRGGAEEAF RLAGQGLRDT TRVAGGDPRL WTDILRANSG PLVGVLRDLH 
EDLSLVLASL DVLSRSGPGQ GARETGRVRD LLDRGSQGLG LLREQPPGGA RLRVAVEEAP 
GELARLLAVL DESGVTADDV SASWDQDTLT AEFAAPATAA GPLLRRLGAE GWTAGYADLA 
TDSEVGALR