Gene Ndas_1130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1130 
Symbol 
ID9244980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1385773 
End bp1386531 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003679077 
Protein GI297560103 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGCGA CGGCTGGGGG TGGCAACCAG GGGCGCACCC TGGACCGGGC TCTGGACGTG 
CTGGAGTGCC TGGAGCGGGC GCGCGGCCCC CTGCGGCTCA GCGACATCGC GCGGGAGAGC
GGGCTCCACC TCGCCACGAC GCAGCGCACC GTCAACCAGC TCGTACGGCG CGGATACGTC
CAGCAGGAGC GCCTGGGCTA CTCGCTCGGG CCGGTGGTGC TGTCCCTGGC GCACTCCTTC
GTCGTCAACG ACCGCCTCTG CAGCGTCGCG ACGCCGATCC TCACCGAACT GTCGGCCACG
ACCGGTCTGA CCTCGTCGGT CTACGTGCGC TCGGGACAGG AGCGCATCCT CATCGCGCGC
GTGGACGGAG CCGACCCGCT GCGCTACCAG TTCCCCATCG GGCGCAGGGT GCCCCTCAAC
ATCGGCGGCG GCAAGGTGCT GCTCAGCGAC TGGGACGACG AGGAGCTCGA CGCCTACCTC
GCCGACCACG CCGAGGTGCG CCTGGCCTCG GGCAGAACCC AGGACGCCGC CGACCTCCGG
GCGCAGATCG AGCGGATCCG GGAGGTCGGC TACCACCTCG CCGAGTCCGA GCGGGAGCCC
GGCGCCCTCA GCCTGACCCG GCTGCTGTAC GACTCCGAGG GCGAGACCCT GGGCGCCGTC
AACCTGGTGA CCACCAGTGA CAGGACCAGC CCCGAGGAGC TGCTGTCCCA GCTTCCCGAG
CTGTCACGGG GCGCCAACGC CATCGGGGTG CGCGCCTGA
 
Protein sequence
MGATAGGGNQ GRTLDRALDV LECLERARGP LRLSDIARES GLHLATTQRT VNQLVRRGYV 
QQERLGYSLG PVVLSLAHSF VVNDRLCSVA TPILTELSAT TGLTSSVYVR SGQERILIAR
VDGADPLRYQ FPIGRRVPLN IGGGKVLLSD WDDEELDAYL ADHAEVRLAS GRTQDAADLR
AQIERIREVG YHLAESEREP GALSLTRLLY DSEGETLGAV NLVTTSDRTS PEELLSQLPE
LSRGANAIGV RA