| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1120 |
|---|
| Symbol | |
|---|
| ID | 9244970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 1374141 |
|---|
| End bp | 1376705 |
|---|
| Gene Length | 2565 bp |
|---|
| Protein Length | 854 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | putative integral membrane protein |
|---|
| Protein accession | YP_003679067 |
|---|
| Protein GI | 297560093 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.310464 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAT TTCTCTACAG ACTCGGGCGT GCGTGCGCAC GTCGCGCCCG AACCGTCATC
GCGGTCTGGC TGGCCCTCCT GGTGGCCTCC GGCACCGCCT TCTTCCTCTT CTCCGGTGAG
CTGGAGGACA GCTTCTCCAT CCCGGGGACG CCCACCGACG AGGTGGAACA GCTCCTGTCG
CAGGAGTTCT CCGGGATGGG CGGCGGCGCG GGCACCGTCG TCTACCAGAC CGAGGACGGC
TCGGACTTCA CCCGGGAGCA GCGGGAGGCG ATAGCCGACC GGGCCGAGCA GGCCGCCGGG
CTCTCCGGCG TGGAGGACGT GATCGACCCG TTCGCCACGG AGGAGCAGCG CGCCGACCAG
CAGCAGGAGC TGGAGGAGGG CCGCGACGAG CTGGAGAGCG GCCTGGAGGA GCTCGAAGCC
GGTCAGGCCG AGCTCGACGC GGGCCGCGAG CAGGCCGAGG CCGCCGGGAT GATCGACCAG
GCCGGCCCCG GGCTCGACGC CGAACAGGTC GTGATCGACC AGAACCGCGA GGAGCTGGAG
GCGGGCCTGG AGGAGCTGGA GCGGGGCGAG GCCATGCTGG AGATGGCCTC CGAGATCCGC
TCGGTCTCCG AGGACGGCGA CACCGCCCTG GTCCGCGTCG CCTTCACCGA CAGCCAGACG
GAGATCACCC CGGAGACCCG CGACGCCGTC ATGGAGGTCT TCGAGAGCGA CCCCGTGCCC
GGCACCACGG TCGACTTCGG CAACGACATG GCCATGACCA TGCCCTCCCT GGTCAGCACC
GCCGAGGTGA TCGGCGTGAT CGTGGCCGGC GTGGTCCTGG TGGTCATGCT GGGCACCCTG
GTGGGCGCGG GCCTGCCGAT CCTGACCGCG CTCGTCGGCG TCGGTGTGGC CACCCTGATC
GCGATGTCGC TGTCCGGGGT GCTGGAGATG GCCTCGGTGA CACCGATCCT GGGCCTGATG
CTGGGCCTGG CCGTCGGTAT CGACTACGCG CTGTTCATCA TCAACCGGCA CCGCCGCCAG
CTCAAGCAGG GCGTCGACGT CGGTTCCTCC ATCGGCCTGG CCAACGGGAC CGCGGGCAAC
GCCGTGGTCT TCGCGGGCAC GACCGTGCTC ATCGCGCTGC TGGGCCTGAA CCTGACCGGG
ATCGGGTTCC TGGGCCTGAT GGGCAGCGTG GCCGCCGTCT CCATCGCCAT CGCCGTGTTC
ATCGCGATCA CGCTCGTTCC GGCGCTGCTG TCGCTGGTGG GCGCGCGCAT CCTGTCGCGC
CGCGAGCGCG CCCGCCTCGC CGGGAGCGCC TCCGCCTCCG GCCGGGGCGC GCACGAGGCG
GAGCGGGTCA AGCCGATGTC GACCGGCCGC GCGCTGGCCC AGGCCGCGGT GGCCGTGATC
GCCCTGGGCG TGGTCGCCCT GCCCGCGCTG GACCTGCGCC TGGGCATGCC CGACGGCTCC
TCCGAGCCCA CCGACTCCAC CCAGTACCGG GCCTTCACCG CCGTGGAGGA GAACTTCGGC
GCGGGGCAGA ACGGCACGCT CCTGGTCGTG GCCGAGCTGA CCGGCGGACC CGACGAGGAG
TCCGCGGAGC GCAACGCCGA GGAGGAGCAG GCGCTGGTCG CCGAGGAGAT CTACGCCCAC
GACGACGTGG CGGCGGTGGC CCCCGTCGGC GTCTCCGAGG ACCACACCCT GGCCATCTTC
CAGGTCGTGC CCGTCGAGGG CCCGGCCAGC GCCTCCACCG AACAGCTCGT GCACACCCTC
CGCGACATGG AGCCGATCGA GGGCACCGGT CCGCTGGGCG TCGCGGGCAT GGCCAGCGGC
AACATCGACA TCTCCGAGAC GCTGAGCGAC GCGCTGCCGA CCTACCTCGC GGTGGTCGTG
GGCCTGTCCC TGGTGATCCT GCTGCTGGTG TTCCGGTCGG TCTTCGTGCC GGTCGTGGCC
ACGCTCGGGT TCATCCTGTC CTTCTTCGCC GCGCTGGGCG GCGTGGTGGC CGTCTACCAG
TGGGGCTGGC TGGGCGGCCT CTTCGGGCTG GAGAACACCG GACCGGTGCT GAACTTCCTG
CCGACGCTGC TGGTCGGGAT CCTGTTCGGC CTGGCCATGG ACTACATGCT CTTCATCGGC
ACGGGCATGC GCGAGGCCTA CGTGCACGGT TCGCCCTCGC GGCTGGCCGT GGTGCAGGGC
TTCCGTGCCG GACGCTCGGT GGTCACCGCC GCCGCGATCA TCATGATCTC GGTGTTCGGC
GGATTCGTCT TCTCGCACAG CGTCATGATC AGCTCGATCG GCTTCGCGCT CGCCTTCGGC
GTGCTCATCG ACGCCTTCGT CGTGCGCATG GCGCTGATCC CCGCGCTGAT GCACCTGGCG
GGCAACGCCG CGTGGTGGCT GCCCGGCTGG CTCGACCGGA TCCTGCCCGA CATCGACGTG
GAGGGCGCCT CACTGGAGCG CCGCCACCCG CGTGAGCAGG GGGCCGGGAC CGGCGGGGAC
ACCGACGGCG ACGGAACCAC CGGCGACGCG TCGGCCGCCG GGGACACGGG TTCGCCCTCC
CGCAAGGAGG ACGACACGGA CCGGGTGTCC TCCGAGCGGC GCTGA
|
|---|
| Protein sequence | MAEFLYRLGR ACARRARTVI AVWLALLVAS GTAFFLFSGE LEDSFSIPGT PTDEVEQLLS
QEFSGMGGGA GTVVYQTEDG SDFTREQREA IADRAEQAAG LSGVEDVIDP FATEEQRADQ
QQELEEGRDE LESGLEELEA GQAELDAGRE QAEAAGMIDQ AGPGLDAEQV VIDQNREELE
AGLEELERGE AMLEMASEIR SVSEDGDTAL VRVAFTDSQT EITPETRDAV MEVFESDPVP
GTTVDFGNDM AMTMPSLVST AEVIGVIVAG VVLVVMLGTL VGAGLPILTA LVGVGVATLI
AMSLSGVLEM ASVTPILGLM LGLAVGIDYA LFIINRHRRQ LKQGVDVGSS IGLANGTAGN
AVVFAGTTVL IALLGLNLTG IGFLGLMGSV AAVSIAIAVF IAITLVPALL SLVGARILSR
RERARLAGSA SASGRGAHEA ERVKPMSTGR ALAQAAVAVI ALGVVALPAL DLRLGMPDGS
SEPTDSTQYR AFTAVEENFG AGQNGTLLVV AELTGGPDEE SAERNAEEEQ ALVAEEIYAH
DDVAAVAPVG VSEDHTLAIF QVVPVEGPAS ASTEQLVHTL RDMEPIEGTG PLGVAGMASG
NIDISETLSD ALPTYLAVVV GLSLVILLLV FRSVFVPVVA TLGFILSFFA ALGGVVAVYQ
WGWLGGLFGL ENTGPVLNFL PTLLVGILFG LAMDYMLFIG TGMREAYVHG SPSRLAVVQG
FRAGRSVVTA AAIIMISVFG GFVFSHSVMI SSIGFALAFG VLIDAFVVRM ALIPALMHLA
GNAAWWLPGW LDRILPDIDV EGASLERRHP REQGAGTGGD TDGDGTTGDA SAAGDTGSPS
RKEDDTDRVS SERR
|
|---|
| |