Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1114 |
Symbol | |
ID | 9244964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 1367962 |
End bp | 1368522 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003679061 |
Protein GI | 297560087 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.213128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAATCG TGAACGCTTC GAACACCCGC GACCGCATCC TCGACTCCCT ACAGGACATC CTCGTCGGTG AGGGTTATTC CGCGGTGACC CTGGAGGCCG TGGCCCGTGA CGCCGGGGTG TCCAAGGGAG GACTGCTGTA CCACTTCCCG TCCAAGGCCG CCATGCTCAC CGGGCTCATC GAGCGCCTGC GCGTGCTGGC GGAGGAGGAG TTCCGGGAGG CCGTGGAGGG GGAGGAGGGC GTGGTCCGCG TCTTCCTGCG CACCTCGCTG CCGCGCAGCC CCGAGGAACG GGAGCTGTAC TGGGCGGTCA TCGCGGCCCT GCGCGGCCAG GAGGACATGC CCGAGGAGGC CGTCCGCACG GTCCAGGGCC TCTTCAGCCG CTGGGGCGAC CTATTGCACG AGGAACTCAC CGACCCGGTC CTGGCCGAGA TCATCCTGCG CGCGGGCGAC GGGCTGTACA TGGCGGCGAT CGCCGGGCTG CCCCAGCCCG ACCCGGCGCT GACGCAGCGG ATGATCGACC GCCTGGTGGA GGCCTCCGAC AAGGCGCGCC GCGAGCGCTG A
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Protein sequence | MSIVNASNTR DRILDSLQDI LVGEGYSAVT LEAVARDAGV SKGGLLYHFP SKAAMLTGLI ERLRVLAEEE FREAVEGEEG VVRVFLRTSL PRSPEERELY WAVIAALRGQ EDMPEEAVRT VQGLFSRWGD LLHEELTDPV LAEIILRAGD GLYMAAIAGL PQPDPALTQR MIDRLVEASD KARRER
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