| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1093 |
|---|
| Symbol | |
|---|
| ID | 9244939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 1342475 |
|---|
| End bp | 1343824 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003679041 |
|---|
| Protein GI | 297560067 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.672028 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGTCGT ACCGCAGACT GCTCCACGAG TACCCCACCG GAGCCCGGCG CCGGCTCCTG
CTCGCCGTCG TCGTCCTGGC GTTGTTCATC TCGGCCTTCG AAGGACAGCT CGCACCGGTC
CTGCCCCTGC TGCTGGCCGA CCTCGGGCTG TCCCTGGAGG TCTACGGGCT GATCACCGCC
GTGTCGCTGC TGTTCGGCGC CGTGTCCGGT TACCTGGGCG GCGAGTTGGT CGACCGGATC
GGCCGCGTCC GCGTACTGGT GCCGTTCATG TTCCTGTCCG CGGCGGCGTG CCTGTTCATG
GCGCTGTCGC AGACGGTCGT CCACTTCACC GCCGCGCGTA TCCTGCTCGC CTTCGTCGAG
GGTGTGGCGA TGGCCGGCAC CCAGCCCCTG ATCCGGGACT TCACGCCGCG GATGGGACGG
GCCCAGGCCT TCGCGTTCTG GAGCTGGGGC CCCGTCGGAG CCAACTTCTT CGCGGCGGCC
GTCGCCGCGC TGACGCTCGA CCTGTTCGAC AACTCCTGGC GCGCGCAGAT CTTCGTGATG
TCCGGCCTGG CCTTCGTGGG CGCGACGGTC GTCGCCCTCA CCCTGCGCGA CCTGGCTCCG
AACCTGCGGC GCACCATCCG CCTCACCGAG CATGCGACCC GCGGGAGCGG GGCGGCCCCC
GCCGGGCAGC GGCTGCGGCT GCTCCTGCGC CGCCGTGTCG TCTGGGCGCA CGTGGCCGCG
ATGTCGCTGC TCTACGTCCT GCTCGCCACC ATGAACGCCT ACGGCCAGAC CATGCTGGTG
GACCACTTCG CCGTCGCGGT GCGCACGGCG TCCGCGATCG TGATGTCGTT CTGGGTCAGC
AACCTGGCGG CCAGCCTGGT CTTCGCCCGG CTCTCCGACA GGGCGCAGAA CCGCAAGCCG
TTCCTGGTCC TCGGGGCGCT GGCGGCGACG CTGCTGCTCG GGGCGCTCGT CGTCACGATG
GGCGCGGGGG CGTCCGCCTC ACTGCCGCTG GTCATCGTGC TGCTGACCGG CGTCGGCCTC
TCGCTCGGCG CCGTCCTCGG CCCGTGGATG GCCAGCTTCT CGGAGTACAC CGAGGAGGTC
CACCCGGACG CCCAGGGGGT GGCCTTCGGC CTCAACCACT TCGTGAGCCG GTTGTTCATC
CTCGCCGCGG TGCTGTTCGC TCCGCAGGTG GTCGCGGTGG GCGACTGGCG GGTGTGGATG
ACGGTCACCC TGGTGACGAC AGCGGCCTTC GCGGTCGTCA CCACACAGGT CCAGGGCCGC
CTGCGGCGCG CGACCGGTTC CGCGTCGGCG GAGGAGGCCG GTGCGGCCGT CGCCGCGACC
GGGGCGCCCG AGGACTCCCG GAGTTCCTGA
|
|---|
| Protein sequence | MPSYRRLLHE YPTGARRRLL LAVVVLALFI SAFEGQLAPV LPLLLADLGL SLEVYGLITA
VSLLFGAVSG YLGGELVDRI GRVRVLVPFM FLSAAACLFM ALSQTVVHFT AARILLAFVE
GVAMAGTQPL IRDFTPRMGR AQAFAFWSWG PVGANFFAAA VAALTLDLFD NSWRAQIFVM
SGLAFVGATV VALTLRDLAP NLRRTIRLTE HATRGSGAAP AGQRLRLLLR RRVVWAHVAA
MSLLYVLLAT MNAYGQTMLV DHFAVAVRTA SAIVMSFWVS NLAASLVFAR LSDRAQNRKP
FLVLGALAAT LLLGALVVTM GAGASASLPL VIVLLTGVGL SLGAVLGPWM ASFSEYTEEV
HPDAQGVAFG LNHFVSRLFI LAAVLFAPQV VAVGDWRVWM TVTLVTTAAF AVVTTQVQGR
LRRATGSASA EEAGAAVAAT GAPEDSRSS
|
|---|
| |