| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1066 |
|---|
| Symbol | |
|---|
| ID | 9244912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 1312342 |
|---|
| End bp | 1313832 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003679014 |
|---|
| Protein GI | 297560040 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.402473 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGA CACGCCGGTG GCTGCTGCTG GTGACCGTGG CGGCCGGACT GCTGCTCGTC
ACCGTGGACA ACACGATCCT GTACACTGCC CTGCCGACCC TGACCGCTCA ACTGGGGGCG
ACGGGCGCGC AGAGCCTGTG GATCATCAAC GCCTACCCGG TGGTCATGGC CGGTCTGCTG
CTGGGCAGCG GCACGCTGGG CGACCGGATC GGCCACGTGC GCATGTTCGT GGTCGGGCTG
GTGGTCTTCG GCCTGGCCTC GCTGGTCGCC GCGTTCTCCC CCACGGCCTG GGTCCTCATC
GCCTCGCGCG CGCTGCTGGC GGTGGGCGCG GCGGCGATGA TGCCCGCCAC CCTGGCGCTG
ATCAGGATCG CCTTCCCCAT CGAGCGCGAA CGCAACATCG CCATCGCGGT CTGGGGCAGC
GTCTCGGTGG TCGGCGGCGC GCTGGGGCCG ATCGTGGGCG GGGTCCTGCT GGAGTTCTTC
TGGTGGGGGT CGGTCTTCCT CCTCAACGTG CCCGTGGTCA TCGCGGCGCT GGTGGCGACC
GCGCTGATCG CGCCGCCCAA CGTCCCCGAC CCCGGCAAGC ACTGGGACCT GGTCTCCTCG
CTCCAGGCCA TGGCCGGGCT GGTCGCCTCG GTGCTGGCGA TCAAGGAGCT GGCGCACACG
CCGCCGCGCT GGCCGCTCTT CGCCGCCGCC GTGGTCGTGG CCGTGGTGGC CTTCGTCCTG
TTCACGCGCC GCCAGCGCCG TCTGGAGGAC CCGCTGCTGG ACTTCGGGGT CTTCCGCAAC
CCCGCCTTCA CCTCCGGTGT GCTGGCCGCG GCGTTCTCGA TGTTCGCCAT CGGCGGCATC
CAGCTCGTCA CCACCCAGCG CTTCCAGCTG GTCGTGGGCT TCACGCCGCT GGAGGCCGGG
CTGCTGGTGG CCGCCGTGGC GGCGGGTTCG CTGCCGACCG CGCTGCTGGG CGGGGCGTTC
CTGCACCGGA CCGGCCTGCT GCCCCTGATC GCGGGAGGTC TCGCCGCAGG CGTGGCGGGT
GTGGTCGTCT CGCTCCTGGG CTTCCAGACG GGCATCGGCT GGCTCGTCGC GGGGCTGCTG
CTGACCGGCG CCGGACTGGG TGCGGCGATG TCGGTGGCCT CCACGGCGAT CATCGGCAAC
GCGCCCGCCA GCCGCGCCGG GATGGCCTCC TCGGTGGAGG AGGTCTCCTA CGAGTTCGGC
AACCTGACCG CGGTGGCCCT GATGGGCAGC CTGGTCACCT TCGTCTACGC GGCCGCCGTC
CAGCTGCCGC AGGGCGCCCC GGAAGCCGCC GGGAGGAGCC TGGCCGACGC CCTGGCCTCG
GCCGGGGGCG ACGACGCGGT GGTCGCCGCG GCCCACGCCG CCTTCGACAC CGGCTACCTG
GTGGTCATGG TCGTGGTCGC GGCGGTCCTG GCGTGCGGCG CGGCCCTCAC CTGGCGGCTG
CTGCGCCACC ATGGTCCCGG CACGTCCTCG TCGGCGTACG CGGACCACTG A
|
|---|
| Protein sequence | MTATRRWLLL VTVAAGLLLV TVDNTILYTA LPTLTAQLGA TGAQSLWIIN AYPVVMAGLL
LGSGTLGDRI GHVRMFVVGL VVFGLASLVA AFSPTAWVLI ASRALLAVGA AAMMPATLAL
IRIAFPIERE RNIAIAVWGS VSVVGGALGP IVGGVLLEFF WWGSVFLLNV PVVIAALVAT
ALIAPPNVPD PGKHWDLVSS LQAMAGLVAS VLAIKELAHT PPRWPLFAAA VVVAVVAFVL
FTRRQRRLED PLLDFGVFRN PAFTSGVLAA AFSMFAIGGI QLVTTQRFQL VVGFTPLEAG
LLVAAVAAGS LPTALLGGAF LHRTGLLPLI AGGLAAGVAG VVVSLLGFQT GIGWLVAGLL
LTGAGLGAAM SVASTAIIGN APASRAGMAS SVEEVSYEFG NLTAVALMGS LVTFVYAAAV
QLPQGAPEAA GRSLADALAS AGGDDAVVAA AHAAFDTGYL VVMVVVAAVL ACGAALTWRL
LRHHGPGTSS SAYADH
|
|---|
| |