Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1023 |
Symbol | |
ID | 9244869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 1250996 |
End bp | 1251805 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003678972 |
Protein GI | 297559998 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.048156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0140553 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGAAAAC AGTACGTCAT GCGGTTTTCG CGCGGCAAGT GCTACAGTCG CGCCATGGCA CGACGAGGCT CCTACGCGAA GGGCGTGGCC AAGCGCGGGG AGATCCTCGA CGCGGCGCTC ACCGTCATCG GACGCGACGG GTACAGCCGC GCGACGGTGC GCGAGATCGC CGACGCGGTC GGACTCAGCC AGAACGGCCT GCTGCACCAC TTCGGGAGCA AGGAACGGCT CTTCGTCGAG GTGCTGCGCC ACCGCGACGA ACTCGACCGG CTGGCCTACG GGGAGGGCGC CGACCGGGGT TCCGAGGCCG GTGCTCGGCG TCCCGGCGGT GCCGGAGAAA GCCCCGACGG CGCCGAACGC GGTCCTGACG CCGCCGGACG CCCCGGCATC GCCGATTCGC TGGTGCGGCT GGTCCGGCAC AACGCCGGGG TGCCGGGCCT CGTGCAGTTG TACTCGCGCC TGTCCGCGGA GGCCGCCGAG GAGGGGCATC CCGCCCACGG CTTCTTCCGG GAGCGCTACG CCACGGCCCG CGGGATCATC GCGGAGGAGA TCCGGCGCCT CCAGGCGCAG GGGCGGTTCT CCGCAGAGCA GGACGCCGAC CGCCTGGCGG TGCTGGCCGT GGCCCTCATG GACGGCCTCC AGGCGCAGTG GTCCTACGAC TCCGGCGTGG ACATGGCCGA CCACATGGCC CACTTCCTCG GCCTCGTCGG CCTGCGGGCC GCCGGGCCGG ACCCGGCAGG GGAGGGGCGG GTCCCCGGGG GCGCGGCCCC CGACGGCCCG GTTCCCGGGG GCTCCACCGC AGAGGGGTGA
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Protein sequence | MRKQYVMRFS RGKCYSRAMA RRGSYAKGVA KRGEILDAAL TVIGRDGYSR ATVREIADAV GLSQNGLLHH FGSKERLFVE VLRHRDELDR LAYGEGADRG SEAGARRPGG AGESPDGAER GPDAAGRPGI ADSLVRLVRH NAGVPGLVQL YSRLSAEAAE EGHPAHGFFR ERYATARGII AEEIRRLQAQ GRFSAEQDAD RLAVLAVALM DGLQAQWSYD SGVDMADHMA HFLGLVGLRA AGPDPAGEGR VPGGAAPDGP VPGGSTAEG
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