Gene Ndas_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0952 
Symbol 
ID9244797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1168081 
End bp1168863 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content69% 
IMG OID 
Productphage shock protein A, PspA 
Protein accessionYP_003678902 
Protein GI297559928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0811243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.359878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGT TTCAGCGACT TTCGATGATC TTCAGGTCCA AGGCCAACAA GGCCTTGGAC 
TCGGTCGAGG ACCCAAGGGA AACGCTCGAC TACTCGTACC AGAAGCAGCT CGAGCTTCTA
CAGAAGGTGC GGCGCGGTGT GGCCGACGTC GCGACCTCCC GCAAGCGCGT CGAGCTCCAG
ATCCAGCAGC TGGAGCAGCA GTCCGGCAAG CTGGAGAACC AGAGCCGCGC CGCCCTGACG
CAGGGGCGCG AGGACCTCGC CCGCGAGGCC CTGACCCGCC GCTCCGGCCT GTCCCAGCAG
ATCGAGGACC TGCGCGGGCA GCACGCCAAC CTCCAGGGCG AGGAACAGAA GCTCACCATG
GCGGCCCAGC GCCTCCAGAC CAAGGTGGAC GCCTTCCGCA CGCGCAAGGA GACCATCAAG
GCCAACTACA CCGCCGCCCA GGCCCAGACG CAGATCAGCG AGGCCTTCTC GGGCATCTCC
GAGGAGATGG GCGACGTCGG CATGGCCGTC CAGCGCGCCG AGGACAAGAC CGCCGAGATG
CAGGCCCGCG CGGGCGCCGT GGACGAGCTG CTCGCCTCCG GCGCGCTCGA CGACGTCACC
GGCACCGCCA GGGACGACAT CCAGAGCGAG CTGGACCGCA TGGCCAGCAC CACCGGCGTC
GAGGCCGAGC TGGAGCGCAT GAAGATGGAG CTCGGCCAGG GCAGCGGCGG TTCCACCCCC
CAGATCGAGG GCGGCAACGG CGCCGGTAAC ACCGGCGGCA CCGGTAACCG GGAGGGCGCG
TGA
 
Protein sequence
MSVFQRLSMI FRSKANKALD SVEDPRETLD YSYQKQLELL QKVRRGVADV ATSRKRVELQ 
IQQLEQQSGK LENQSRAALT QGREDLAREA LTRRSGLSQQ IEDLRGQHAN LQGEEQKLTM
AAQRLQTKVD AFRTRKETIK ANYTAAQAQT QISEAFSGIS EEMGDVGMAV QRAEDKTAEM
QARAGAVDEL LASGALDDVT GTARDDIQSE LDRMASTTGV EAELERMKME LGQGSGGSTP
QIEGGNGAGN TGGTGNREGA