Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0952 |
Symbol | |
ID | 9244797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 1168081 |
End bp | 1168863 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | phage shock protein A, PspA |
Protein accession | YP_003678902 |
Protein GI | 297559928 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0811243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.359878 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGT TTCAGCGACT TTCGATGATC TTCAGGTCCA AGGCCAACAA GGCCTTGGAC TCGGTCGAGG ACCCAAGGGA AACGCTCGAC TACTCGTACC AGAAGCAGCT CGAGCTTCTA CAGAAGGTGC GGCGCGGTGT GGCCGACGTC GCGACCTCCC GCAAGCGCGT CGAGCTCCAG ATCCAGCAGC TGGAGCAGCA GTCCGGCAAG CTGGAGAACC AGAGCCGCGC CGCCCTGACG CAGGGGCGCG AGGACCTCGC CCGCGAGGCC CTGACCCGCC GCTCCGGCCT GTCCCAGCAG ATCGAGGACC TGCGCGGGCA GCACGCCAAC CTCCAGGGCG AGGAACAGAA GCTCACCATG GCGGCCCAGC GCCTCCAGAC CAAGGTGGAC GCCTTCCGCA CGCGCAAGGA GACCATCAAG GCCAACTACA CCGCCGCCCA GGCCCAGACG CAGATCAGCG AGGCCTTCTC GGGCATCTCC GAGGAGATGG GCGACGTCGG CATGGCCGTC CAGCGCGCCG AGGACAAGAC CGCCGAGATG CAGGCCCGCG CGGGCGCCGT GGACGAGCTG CTCGCCTCCG GCGCGCTCGA CGACGTCACC GGCACCGCCA GGGACGACAT CCAGAGCGAG CTGGACCGCA TGGCCAGCAC CACCGGCGTC GAGGCCGAGC TGGAGCGCAT GAAGATGGAG CTCGGCCAGG GCAGCGGCGG TTCCACCCCC CAGATCGAGG GCGGCAACGG CGCCGGTAAC ACCGGCGGCA CCGGTAACCG GGAGGGCGCG TGA
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Protein sequence | MSVFQRLSMI FRSKANKALD SVEDPRETLD YSYQKQLELL QKVRRGVADV ATSRKRVELQ IQQLEQQSGK LENQSRAALT QGREDLAREA LTRRSGLSQQ IEDLRGQHAN LQGEEQKLTM AAQRLQTKVD AFRTRKETIK ANYTAAQAQT QISEAFSGIS EEMGDVGMAV QRAEDKTAEM QARAGAVDEL LASGALDDVT GTARDDIQSE LDRMASTTGV EAELERMKME LGQGSGGSTP QIEGGNGAGN TGGTGNREGA
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