Gene Ndas_0877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0877 
Symbol 
ID9244722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp1075115 
End bp1075645 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content72% 
IMG OID 
ProductShikimate kinase 
Protein accessionYP_003678827 
Protein GI297559853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.317471 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAAAAG CGATCGCGGT GCTCATCGGT TCGCCCGGAT CGGGCAAGTC CACCGTCGGA 
GAGGCCCTGG CGGGGCGCCT GGGCGCCGAC CTGTTGTGCA CCGACACCGA GGTCGAGAAG 
CGCGCGGGCA AGCCCATCGG CGACATCTTC GTCGAGGACG GCGAGGAGCG CTTCCGCGCC 
CTGGAACGCG AGGTCGTCGC CGAGGGGCTG CGCGCCTGGG AGGGCGTGAT CGCCGTCGGC 
GGCGGCGCGG TCCTGGACGA GGACACCCAG CGCGACCTGG CCGGACACCA CGTGGTCTAC 
CTCCAGGTGG AGTTCGGTGA GGCCGCCAAG CGCGTGGGCA TGGACGTGGC CCGTCCCCTG 
CTCGCGGGCA ACCCCCGCAC CCGGCTGCGC CAGCTGCTCA ACGAGCGCCT GCCCGTCTAC 
GAGCGCCTGG CCAGCGTCAC CGTGGAGACC ACCGGCTACC ACCCCGAAGA GATCGTCGAC 
GCCATCCTGC CCTCCCTGGC CGGACAGGAC TCCGGAAAGG CCCAGCAGTG A
 
Protein sequence
MAKAIAVLIG SPGSGKSTVG EALAGRLGAD LLCTDTEVEK RAGKPIGDIF VEDGEERFRA 
LEREVVAEGL RAWEGVIAVG GGAVLDEDTQ RDLAGHHVVY LQVEFGEAAK RVGMDVARPL 
LAGNPRTRLR QLLNERLPVY ERLASVTVET TGYHPEEIVD AILPSLAGQD SGKAQQ