Gene Ndas_0800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0800 
Symbol 
ID9244645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp984218 
End bp985780 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content74% 
IMG OID 
Productpolysaccharide deacetylase 
Protein accessionYP_003678750 
Protein GI297559776 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.58232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGTCGT CGACTCGAGT CCACCCGAAC GAGGCCGCCC CCTGCCCCGG GGCCGGGGGG 
AACCGGCCGT GGGAACGCAG AGCCCGGTGG CCCGGGGCGG CGCTGGTCGC ACTGGTCCTG
CCCCTGGCCG CGTGCGGCAC CGAGGGGATC GCCTCCGGGG GCGGTGAGGA CCCGGAACTG
ATCACGGTGG TGGCGGCGGA GCCGGGGGAC GGGGTCACCG AGTGGCGCGG GGACGCCTCC
GACTTCGAGG ACCACCCGTA CAAGCCCGAG GGGCTCACGA TCGACGTCGC CTACCCGGTG
TTCTCGGGTG CCGACGCCTT CGCCGAGGAA CTGGCCGCCC GGGTGGACCA GGAGGTGCGG
GACTACCGGG GCGCCAGCCG GGATCCGGTG AGTCTGGGCG TCGACTGGGA GGTGGTCGCC
GCCGGGGACG GGGTGCTGGG CGTGCGCCTG GTGCGCACCG AGGAGGACTT CCACGGCCTG
CGCCGGGGGT ACGGGACGTA CTGGTACGAC GCGTCCACCG GCCACACCGC CTACTCCACG
GAGCTGCTGG CCGACGACGC GGCGCTCCGG GAGCTCAACG GGATCGTCCG CGCCTCGTTC
GCCGACGAGG AGGCGGTGGA CGCGCGGGGG CTGCAACCGG TGATGCGCAC CTACGACTCG
ATGGGGTTCA ACGGCGACGG GGACCTGGTG GTGGAGTTCG ACGACGGGCA CCTGTCCCCG
ATCGTGGAGG GCCACCCCCC GTCCTCGGAG CCGGGGCGGA TGGTCGCGGT GGTGCCCGCC
GAGGAGGCCG CGCCCCTGCT GTCCGGCCTG GGCGAGCGGG CGCGGGAGGC CGCCATGGCG
GAGGAGCCCG TGCTGGCCGT GGAGGCCCCC GACGCCGAGC CCCCGGCCGA CCCGCCGGTG
CCGGGGGCGG TCTCGGCGGG AGACCCCGAC CTGGACTGCG CCGGGGCCAA GTGCATCGCG
CTGACCTTCG ACGACGGACC GGTGGCGACG ACTCCGCGGC TGCTGGACCT GCTGGCGGAG
GAGGAGGTCG CGGCCACCTT CTTCCTCAAC GGCAACCCGG CGCTGACCCG GCCCAGCGTG
ATCCGGCGCG CCTACGCCGA GGGGCACGAG ATCGGCAGCC ACAACCACCT GCACGAACGC
ATGCCCGATG CCTTCGAGGG GGAGGAACTG GTCCACCAGG TGGCCGCGGT GAGCGCGATG
GTGCGCCGCC AGACGGGCCA CACCGTGGAG CTGTTCCGGC CGCCGTTCGG CGACAGTTCA
CCGGAGGTGC TGGGGGAGAT CGGCCGTCAG GGCATGGCCG AGATCCTGTG GAGCCAGGAC
AGCAAGGACT GGACCGGCAT GAGCCGCGAC GAGGTCGTGG AGAGCGTGGT GGACGGCGCC
CGCCCCGGGG GCGTGGTACT GCTGCACGAC ACCCTGGAGC CGACCCTGGC CGCGGTCCCG
GAGATCATCG AGCGGCTGCG GGCCGACGGG TACGAGTTCG CGACCGTCAG CCAGGTCTAC
GACGGCCCGG AGGCCGGGAA GAGCTACCCG CCCGAGGGGT TGTCCGCGCC CGCCGGTTCC
TGA
 
Protein sequence
MLSSTRVHPN EAAPCPGAGG NRPWERRARW PGAALVALVL PLAACGTEGI ASGGGEDPEL 
ITVVAAEPGD GVTEWRGDAS DFEDHPYKPE GLTIDVAYPV FSGADAFAEE LAARVDQEVR
DYRGASRDPV SLGVDWEVVA AGDGVLGVRL VRTEEDFHGL RRGYGTYWYD ASTGHTAYST
ELLADDAALR ELNGIVRASF ADEEAVDARG LQPVMRTYDS MGFNGDGDLV VEFDDGHLSP
IVEGHPPSSE PGRMVAVVPA EEAAPLLSGL GERAREAAMA EEPVLAVEAP DAEPPADPPV
PGAVSAGDPD LDCAGAKCIA LTFDDGPVAT TPRLLDLLAE EEVAATFFLN GNPALTRPSV
IRRAYAEGHE IGSHNHLHER MPDAFEGEEL VHQVAAVSAM VRRQTGHTVE LFRPPFGDSS
PEVLGEIGRQ GMAEILWSQD SKDWTGMSRD EVVESVVDGA RPGGVVLLHD TLEPTLAAVP
EIIERLRADG YEFATVSQVY DGPEAGKSYP PEGLSAPAGS