| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0662 |
|---|
| Symbol | |
|---|
| ID | 9244504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 811032 |
|---|
| End bp | 811532 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | alkylhydroperoxidase like protein, AhpD family |
|---|
| Protein accession | YP_003678613 |
|---|
| Protein GI | 297559639 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.236463 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.858367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCA CCGCCAGCCA GCAGAAGACC CAGTCCCGGC TGCCCAACCC CGCCGTGCTC
GTTCCCGAAC TGGGGGAGGT CAGCAAGGCG CTGTTCGCGG CCACCGGGAA TGGCTCGATC
CCGCGGACCA CCGTGGGCCT GGTGCAGCTG CGCGCCGGCC AGATCCTCGG GAACACCTAC
CTGACCGTCC TGCACTCCGG CAACCTCCGC GGGGCCGGGG AGTCGGAGGA GCGCATCACC
GCCGTGGCCT CCTGGCGGGA CGCCCCCTGC TTCACCGACG CCGAGCGGAT CGCGCTGGCG
CTGCTGGAGG CCGTCCTCAC CGCCAACCCG CACGGCGAAC GCGTCGGCGA CGACCTGTAC
GCCGCCGCTT CCGCCCACTA CGACGACAGG GCGCTCGCCA CGCTCATCAT GGCGATCGGC
CAGGTCTGCT TCTTCGCCCC CCTCGCCCTC ATCGGCAGGC CCCTCCCCGG TGTGGCGCCC
GCCGAGCAGT GGCGGGACTG A
|
|---|
| Protein sequence | MSTTASQQKT QSRLPNPAVL VPELGEVSKA LFAATGNGSI PRTTVGLVQL RAGQILGNTY
LTVLHSGNLR GAGESEERIT AVASWRDAPC FTDAERIALA LLEAVLTANP HGERVGDDLY
AAASAHYDDR ALATLIMAIG QVCFFAPLAL IGRPLPGVAP AEQWRD
|
|---|
| |