| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0527 |
|---|
| Symbol | |
|---|
| ID | 9244368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 643422 |
|---|
| End bp | 646625 |
|---|
| Gene Length | 3204 bp |
|---|
| Protein Length | 1067 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_003678480 |
|---|
| Protein GI | 297559506 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.64955 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCG CCGCGGTCAT GTCGCTCGGC AACCGGGCAC TGGTCCTGCT CATCACCCTG
GCAGTCCTCT TCTTCGGAGT CCTCGCAGCG GCGTCGGCCA AACGCGAGCT CTTCCCCGAC
ATGTCCCTGC CGATGGTGAT GGTCTCCGGC ACCTACCAGG GGGCCGCCCC CCAGGTGGTG
GAGAGCCAGG TCACCGAGCC GCTGGAACAG GCCGTCCAGA GCGTCCCGGG CGTCACCACG
GTCACCTCGA CCTCCAGCAC CGGCTCCTCC CAGGTCACGG TCGAGTTCGA CTACGGCCAG
GACCAGGACG ACCTCGTCCG CCAGACCCAG ATCGCCGTCG ACCAGGTCGC GGGTATGCTC
CCCGAGGGCG TCGACACCAG CGTCATGTCC TTCAGCACGG ACATGATGCC GGTCGTGATG
CTCGCGGCGG GCGCCGGGGA CGGCGACGAC CAGGCCATGG TCGACCCGCT GGAGACCCAC
CTCATCCCCG AGCTGGAGTC CGTCGAGGGC GTGCGCTCGG CGACGATCAC CGGCGCGGTG
GAGTCCGACG TGGTCGTCAC GCCGGACGAG GACGAACTCG CCGCCAACGG CCTGTCCCCG
CAGAGCCTCG TGGACGCCCT GCAGTCCAGC GGCCTGCTCC AGCCGGGCGG GGACGTCGAG
TCCGACGGCC GCAGCCTGAG CGTGACCACC GGTGACCAGT TCACCTCGAT CGAGCAGGTC
GAGGAGGTCT GGCTCCAGCC CGCCGCCGCG GGCGCGGACA TGTCCGCCGC GGCGCCCGGC
GCGCCCCCGG CCGCTCCTGC CGACCCGGTC CGGCTCTCCG AGGTCGCCGA CGTCGAACTC
GTCCAGGACG AGGCCGCCAG TCTGGCGCGC GTCAACGGCG ACCCGAGTAT CGGCGTCATG
GTCATGAAGA CCCCCGACGG CAACACCGTC GAGGTCTCCG AGGGAGTCCA GGCGGTCCTG
GACGAGCAGG CCGACGTCCT GGGCGAGGAC ATCGACATCA GCGTGGTCTT CGACCAGGCC
CCCTACATCA ACGAGTCCAT CATCGCGATG CTCGAAGAGG GCGGCATGGG CCTGCTCGCC
GCCGTGATCG TCATCCTGGT CTTCCTGTTC TCGATCCGCT CCACCCTGGT GATCGCGGTG
TCGATCCCGG TCTCGGTGCT GATCGGGTTC CTGGGCATGC AGGCGTTCGA CTTCTCGCTG
AACATGCTCA CCCTCGCCGC CATCACCATC TCCATCGGAC GCGTGGTGGA CGACTCCATC
GTGGTCCTGG AGAACATCCG CAGGCACCTG GACTACGGCA AGGAGCGGAT GGCCGCGGTC
AAGCAGGGCG TGCGCGAGGT CGCCGCCGCC GTGGTCTCCT CCACGCTCGC GACCATCGCC
GTGTTCCTGC CGCTGGCCTT CGTCGGCGGC CAGGTCGGCG AGCTGTTCCT GCCGTTCGCG
GTCACCGCCA GCCTGGCCCT GGCCGCCTCC CTGATCGTCT CCATCACCCT CATCCCGGTG
CTGTGCTACT GGTTCATGCG CCCCAAGGAG ATCGGGGACG CCACCCAGGA GGAGATCGAG
CGCGAGGAGT ACGAGCGGGA GATGCGCAGC CCGCTCCAGC GTGCCTACCT GCCGATCATC
CGCTGGATCA CCACCAAGCG CAGGACCGCC ACGATCACCA CGCTCCTCGC CAGCGTCGCG
ATCTTCGTCG GCACGGTCTT CATGGCCGGC GGCATCGAGA CCGACTGGAT GGGCCAGTCC
GAGGAGAACA CCTACCAGGT CGTCCAGGAG CTGCCCCCGG GCACGTCCCT GGAGGTCGCC
GACGAGGAGG CGGCCAAGGT CGAGGACCTC CTCGCCGGCT ACGCCTGGGT GGAGTCCTAC
CAGACCAACG TCGGCGGCGG CGGTATGGCC GCCATGTTTG GCGGCGGCGG TGCTGCCCAG
GTGGACTACA GCATCACCGC GGACCCCGAC ACCGACCAGG CCCGCAACCG CGAGGTGCTG
CGCACGGCCC TGGAGGACCT GGACACCGAG TACGAGCCGC GCCTGAGCGC CATGGCCGCC
ATGGGCGGTT CGGGCATCGA GGTGCGGGTC AGCGCCGACG ACCAGGACAC CCTGGTCGAG
GCGGCCGGGA TGGTCGAGGA GGAGCTGCGC GGCATCGACG GCGCCGACGA CGTCGCCAAC
AGCATCTCCG AGTCCCAGCC CGCCCTGGAG GTCCGCGTCG ACGGCGAGGA GGCCGCCGAG
CGGGGCATGA CCGAGGCCAT GATCGGCCAG CAGGTCACCG CCGCCTTCAA CGGACAGAAC
GTCGGAAGCG TCACCCTCGA CGACACGCGC CGCGACATGG TGGTCCGCGT CGACGAGGCG
CCCCAGACCG TGGCCGAGCT GGAGGACCTG CCCGTCACGG GCCCGAGCGG CCAGGCGGTC
CCGCTGTCCG ACGTCGCCGA GGTGGCGGAG GTGCAGCAGC CGCCGGAGCT CACACGGATC
GACGGCATCA CCAGCGCCAC CGTGTCGGCG AGCGCCACCG GTTCCGACCT GGGCGCGGTC
AGCGCCGAGA TCACGCAGGC CCTGGACACC ATGGACCTGC CCGAGGGCGC CACCGCGACC
CTGGGCGGCG TCAGCCAGGA CCAGAGCGAG GGCTTCGCGC AGCTGATGCT GGCGATGGTC
GCCGCGATCG TCATCTGCTA CCTGATCATG GTGGCGACCT TCAAGAGCCT GCTCCAGCCG
CTGATGCTCC TGATCTCGGT GCCGTTCGCG ATCACCGGTT CGCTGGGGCT GCTGCTGGTC
ACCGGCACCC CGCTGGGTGT GGCGGGCATG GTCGGCATGC TGATGCTCAT CGGTGTGGTG
ATCACCAACG CCATCGTCCT GATGGACCTG ATCAACCAGA ACCAGAACAA CGGGATGCCG
CTCAGGGAGG CGATCGTGGA GGGTGCCCGG CACCGTCTGC GGCCCATCCT GATGACGGCG
CTCGCGACCG TCGCGGCGCT GACCCCGATG GCCCTGGGCA TCACCGGCGG CGGGGCGTTC
ATCTCCGCGC CGCTGGCGAT CGTGGTGATC GGCGGTCTGC TGTCCTCCAC CGTGCTCACG
CTGATCCTGG TCCCCGTCCT CTACCAGTTG GTGGAGTGGG GCAGGCAGCG CGGCGCGGCC
CGCAGGCAGG CGCGCCGCGA GCTGCGCAGG GAGCGTAAGG CCGCGGTCGC CGGGACCGAG
CGCACCAAGG AGCCGGTCGG CTGA
|
|---|
| Protein sequence | MNRAAVMSLG NRALVLLITL AVLFFGVLAA ASAKRELFPD MSLPMVMVSG TYQGAAPQVV
ESQVTEPLEQ AVQSVPGVTT VTSTSSTGSS QVTVEFDYGQ DQDDLVRQTQ IAVDQVAGML
PEGVDTSVMS FSTDMMPVVM LAAGAGDGDD QAMVDPLETH LIPELESVEG VRSATITGAV
ESDVVVTPDE DELAANGLSP QSLVDALQSS GLLQPGGDVE SDGRSLSVTT GDQFTSIEQV
EEVWLQPAAA GADMSAAAPG APPAAPADPV RLSEVADVEL VQDEAASLAR VNGDPSIGVM
VMKTPDGNTV EVSEGVQAVL DEQADVLGED IDISVVFDQA PYINESIIAM LEEGGMGLLA
AVIVILVFLF SIRSTLVIAV SIPVSVLIGF LGMQAFDFSL NMLTLAAITI SIGRVVDDSI
VVLENIRRHL DYGKERMAAV KQGVREVAAA VVSSTLATIA VFLPLAFVGG QVGELFLPFA
VTASLALAAS LIVSITLIPV LCYWFMRPKE IGDATQEEIE REEYEREMRS PLQRAYLPII
RWITTKRRTA TITTLLASVA IFVGTVFMAG GIETDWMGQS EENTYQVVQE LPPGTSLEVA
DEEAAKVEDL LAGYAWVESY QTNVGGGGMA AMFGGGGAAQ VDYSITADPD TDQARNREVL
RTALEDLDTE YEPRLSAMAA MGGSGIEVRV SADDQDTLVE AAGMVEEELR GIDGADDVAN
SISESQPALE VRVDGEEAAE RGMTEAMIGQ QVTAAFNGQN VGSVTLDDTR RDMVVRVDEA
PQTVAELEDL PVTGPSGQAV PLSDVAEVAE VQQPPELTRI DGITSATVSA SATGSDLGAV
SAEITQALDT MDLPEGATAT LGGVSQDQSE GFAQLMLAMV AAIVICYLIM VATFKSLLQP
LMLLISVPFA ITGSLGLLLV TGTPLGVAGM VGMLMLIGVV ITNAIVLMDL INQNQNNGMP
LREAIVEGAR HRLRPILMTA LATVAALTPM ALGITGGGAF ISAPLAIVVI GGLLSSTVLT
LILVPVLYQL VEWGRQRGAA RRQARRELRR ERKAAVAGTE RTKEPVG
|
|---|
| |