Gene Ndas_0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0467 
Symbol 
ID9244306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp562239 
End bp564050 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content75% 
IMG OID 
ProductUvrD/REP helicase 
Protein accessionYP_003678420 
Protein GI297559446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.82885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.469599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGCCC TCGCGATCGC CCCGACGTTT CTCAGCGACT TCACCCGCCT CACGCCCGAC 
GTCCAGCTCA ACACCCTGGC CGTGATGCGC GCCTGCCAGG TCGGCGACGA GCCCGACCTG
GAGTCCGTCG CGGGCGCCGC CGACCCGGGC GTCCGGGTCG TCAGCATCGC CCCCGACTGG
TCCGGCGTCG TCGTCCCCGA CGCCGCGGGC CACGGCCGGA CCGGTGACGG CGGCCTCGCC
GACGGCACCC ACTACCGCCT GGTCACCGTG CGCCCGCGCG ACGAGGCCCT GCGCTTCGCG
CGCGACCTGC GCCCCGAGGT GTCGGCCGGG ATCGACCCCG CCGAGGCCGA CCCCACGCCC
AGCGGCCCGC CCGAGCTGGC CGGGGCCCTG AGGGCCCCCT TCGACCAGTG GCAGCTGACC
CTGCACCCCG ACCAGCACCG GATCACCGAG GCGCACTACA ACGGGTCCAC GCAGGTCACC
GGCGGCCCGG GGACCGGCAA GACCGTGATC GCGCTGCACC GCGCCGCCTA CCTGGCCGAG
CGCGACGCCG CCGCCCGCCC CGAGGACACC CGCGAGTCGG TGCTCCTGAC CACCTACAAC
CGGGCGCTGG CGCAGTCCCT GGCCGAGCGG ATGGACCAGC TGCTGCCCGA CCCCGCCGTA
CGCGCCCGCG TGCGCGTGGC CACCATCGAC AGCCTCGCCC GCTCCGTCGT GCAGACCCAC
ACCAGCGTGG CGCCCCGCAT GGTCGGCAAG GACGAGCTGG CCCGGCGCTG GCGCGCGGTG
GCGGTGGCCG ACGGCCTGCC CTTCTCCGGC CGCTTCCTGG TGGACGAGTG GGAGCAGGTG
ATCCTCGCCA AGGGCCTGGA GCTGCTGCCC GACTACATCC GCTGCGAGCG CAGCGGGCGG
GTGCAGCACC TGGCGCCCGA GCACCGCCGC CAGGTGTGGG AGACCGTGCG GCGCTACGTC
GGCGCCATGA GGGTGGAGGG GATGTGGTCC TACCCCCAGC TGGCCGCCGA GGCCGCGCGG
ATCCTGGGCC GCCGCGAGCC GCTGTTCCGG CACGCCGTGG TCGACGAGGC CCAGGACCTG
CACCCGGCCC AGTGGCGGAT GCTGCGCGCC GCCGTCCCGG AGGGGCCGGA CGACCTGTTC
ATCGTCGGTG ACCCGCACCA GCGGGTGTCC GACAACCGGG TGTCGCTGGC CTCGCTCGGC
ATCAACGTGC GCGGGCGCGG CCAGCGGCTG CGGGTGAGCT ACCGGGTGAC CCAGGAGATC
CTGGACTGGA GCATGCCGAT CCTGGACCGC CGTGCGGCCC TGGGCATGGA CGACAACGCC
GACACCCTGG CCGGGTACCG CTCGCTGCTG CGCGGTCCGG CGCCGGTGGT GCGCGGCTGC
GAGGACCGCG CCGAGGAGCT CACCGCGCTG GGCGACTGGG TGCGGGTGTG GCTGGAGGCC
GGGGTCAACC CGGCGGAGAT CGCGGTGGCC GGGCGCAACC AGTGGATCGT GCGCGGCATC
GCCAAGGAGC TGGAGGCCAG GGGCGTTCCC ACCGCCCAGC TGGAGGACAG CGGCGCCGCC
GAGGCGGTGC GCGTGGGGAC GATGCACCGG CTCAAGGGCC AGGAGTTCCG GTGCGTGGCG
CTGATCGGCG TCAGCGACCA CCTGCTGCCG CCCAAGGCCG CGATCGAGGC CGCCGACGGC
GACCAGGTGG CGCTGGAGCA CGCCTTCCAG CAGGAGCGGA CGCTGCTGTT CGTGGCCTGC
ACCCGGGCCC GTGACGCGCT GTACGTGTCG CACGTGGGCC GGGCCAGCCG TCTGATCGAC
CCCGGTCTGT GA
 
Protein sequence
MSALAIAPTF LSDFTRLTPD VQLNTLAVMR ACQVGDEPDL ESVAGAADPG VRVVSIAPDW 
SGVVVPDAAG HGRTGDGGLA DGTHYRLVTV RPRDEALRFA RDLRPEVSAG IDPAEADPTP
SGPPELAGAL RAPFDQWQLT LHPDQHRITE AHYNGSTQVT GGPGTGKTVI ALHRAAYLAE
RDAAARPEDT RESVLLTTYN RALAQSLAER MDQLLPDPAV RARVRVATID SLARSVVQTH
TSVAPRMVGK DELARRWRAV AVADGLPFSG RFLVDEWEQV ILAKGLELLP DYIRCERSGR
VQHLAPEHRR QVWETVRRYV GAMRVEGMWS YPQLAAEAAR ILGRREPLFR HAVVDEAQDL
HPAQWRMLRA AVPEGPDDLF IVGDPHQRVS DNRVSLASLG INVRGRGQRL RVSYRVTQEI
LDWSMPILDR RAALGMDDNA DTLAGYRSLL RGPAPVVRGC EDRAEELTAL GDWVRVWLEA
GVNPAEIAVA GRNQWIVRGI AKELEARGVP TAQLEDSGAA EAVRVGTMHR LKGQEFRCVA
LIGVSDHLLP PKAAIEAADG DQVALEHAFQ QERTLLFVAC TRARDALYVS HVGRASRLID
PGL