Gene Ndas_0447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0447 
Symbol 
ID9244286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp540102 
End bp540794 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content70% 
IMG OID 
Producthaloacid dehalogenase, type II 
Protein accessionYP_003678400 
Protein GI297559426 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.399561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTTCAC CCTCCGACAT AGACGTGATC GTCTTCGACG TTCTGGGGAC CATGGTCGAT 
GAGCCCGCCG GTATCGGGCG CGGCATCCGG ACACTGCTCC CGGACATCGA CGACGTGAGG
GCGCGCGAGT TGGTCCAGGT GTGGAACAGG CATGTCGACG AGCAGCAGCA GGAGATCCTC
GCGGGCCGCC GCCCCTACGC CAACAGCACG GTGATCGACC TCGAAGCGGC CACACGCGTC
GCGGCCGAGG CCGGTGTCGA CGACGCGGAC GCGATCCGCT CGCTGGCGGC CTCCGCGCAG
CGGTTGGCGC CGTGGCCGGA CTCCGCCTCC GCGCTGGACC GGATCGCCTC GTACTTCCCG
GTGGTCGGAC TGTCGAACGC CAGCCACCCG GCGCTCACCC GTATCAGTGC ACATGCCGGG
CTCCGCTGGC ACCAGGTGCT CTCCGCCGAG GACGCGCGCG GCTACAAACC CCATCCCGAC
GTGTACCGGC TCGCGATCGC GAACGCGGAC TGCCCGCCGG ACCGCCTGCT CATGGTCGCC
GCCCATGCCT GGGACCTTCG GGGCGCGCAG GCCCTGGGTA TGCGGACCGC CTACGTCGAA
CGCCCCGTCG GGGATCCTCC GCGCGCGACG GACCGCTTCG ACCTGGCCGT GAAGAGCCTC
GACGAACTGG CCATAAGCCT CAACGCGATC TGA
 
Protein sequence
MTSPSDIDVI VFDVLGTMVD EPAGIGRGIR TLLPDIDDVR ARELVQVWNR HVDEQQQEIL 
AGRRPYANST VIDLEAATRV AAEAGVDDAD AIRSLAASAQ RLAPWPDSAS ALDRIASYFP
VVGLSNASHP ALTRISAHAG LRWHQVLSAE DARGYKPHPD VYRLAIANAD CPPDRLLMVA
AHAWDLRGAQ ALGMRTAYVE RPVGDPPRAT DRFDLAVKSL DELAISLNAI