Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0447 |
Symbol | |
ID | 9244286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 540102 |
End bp | 540794 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | haloacid dehalogenase, type II |
Protein accession | YP_003678400 |
Protein GI | 297559426 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.399561 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTTCAC CCTCCGACAT AGACGTGATC GTCTTCGACG TTCTGGGGAC CATGGTCGAT GAGCCCGCCG GTATCGGGCG CGGCATCCGG ACACTGCTCC CGGACATCGA CGACGTGAGG GCGCGCGAGT TGGTCCAGGT GTGGAACAGG CATGTCGACG AGCAGCAGCA GGAGATCCTC GCGGGCCGCC GCCCCTACGC CAACAGCACG GTGATCGACC TCGAAGCGGC CACACGCGTC GCGGCCGAGG CCGGTGTCGA CGACGCGGAC GCGATCCGCT CGCTGGCGGC CTCCGCGCAG CGGTTGGCGC CGTGGCCGGA CTCCGCCTCC GCGCTGGACC GGATCGCCTC GTACTTCCCG GTGGTCGGAC TGTCGAACGC CAGCCACCCG GCGCTCACCC GTATCAGTGC ACATGCCGGG CTCCGCTGGC ACCAGGTGCT CTCCGCCGAG GACGCGCGCG GCTACAAACC CCATCCCGAC GTGTACCGGC TCGCGATCGC GAACGCGGAC TGCCCGCCGG ACCGCCTGCT CATGGTCGCC GCCCATGCCT GGGACCTTCG GGGCGCGCAG GCCCTGGGTA TGCGGACCGC CTACGTCGAA CGCCCCGTCG GGGATCCTCC GCGCGCGACG GACCGCTTCG ACCTGGCCGT GAAGAGCCTC GACGAACTGG CCATAAGCCT CAACGCGATC TGA
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Protein sequence | MTSPSDIDVI VFDVLGTMVD EPAGIGRGIR TLLPDIDDVR ARELVQVWNR HVDEQQQEIL AGRRPYANST VIDLEAATRV AAEAGVDDAD AIRSLAASAQ RLAPWPDSAS ALDRIASYFP VVGLSNASHP ALTRISAHAG LRWHQVLSAE DARGYKPHPD VYRLAIANAD CPPDRLLMVA AHAWDLRGAQ ALGMRTAYVE RPVGDPPRAT DRFDLAVKSL DELAISLNAI
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