Gene Ndas_0389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0389 
Symbol 
ID9244227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp479333 
End bp480424 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content77% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003678343 
Protein GI297559369 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCA CCCCCGCGCC CGCGCCCACC GCCGGACCGG CCCCTCACGA CGCCCTGAGC 
CTGCCCGGCG TGCTCGACGC CGGGCAGCTG CACCGCTCGG CCTCCTACCT CGCGCGCTGT 
CAGGAGGACG GCGGGGCCAT CCCGTGGTTC CCCGGCGGGC ACACCGACGT GTGGGACCAC 
GTGGAGTGCG CCATGGCCCT GACCGTGACC GGCCGCAGCG CGCCCGGACA CGCCGAGGCG 
GCCCGACGCG CCTACCTGTG GCTGGCCGAC AGCCGTGCGC CCGGGGGCGG GTGGCCCGCC 
AAGTTCCGCC AGGGCGTCCC GGTGACGCGG CTGCGCGAGG CCAACCACGC CGCCTACCCC 
GCCGTGGGCC TGTTCCACCA CCTGCTCGTC ACCGGCGACA CCGCGTTCGC CGAGCGGATG 
TGGCCGGTGG TCGAGGAGGG ACTGGAGTTC GTCCTGGCCC TGCGCGGCGA GCACGGCGAG 
ATCCTGTGGG CCCGCTCGGA GAACGGCGCC CCCGGGGACC ACGCCCTGCT GACGGTGTGC 
GCGAGCGTGC ACCACGCGCT GCGCTGCGGC GCCGCCCTGG CCGCGCGCCT GGGCCGCTCC 
CGCCCCGCGT GGACGGCCGC CGCCGACCGC CTCGCGGTGC TCATCAACGG GCACGAGGAC 
CTGTTCGCCG ACCGCGGGCG CTTCTCGATG GACTGGTTCT ACCCCGTCCT GGGCGGCGCC 
GTGCGCGGCG CCGCCGCCAA GGAGCGCATC GCCGAGCGCT GGGACCGCTT CGTGGTGCCC 
GGGCTGGGCG TGCGCTGCGT GAGCGACCAG CCGTGGGTGA CCGCGGCGGA GACCTCGGAG 
CTGGTGCTGG CCCTGGCCGC CGTCGGCGAC GTGGACGCGG GCGTGCGCCT CCTGCGGGAC 
GTGCAGCACC TGCGCGACGC CGACGACGGC GCGTACTGGA CGGGCTACCA GTTCGCCGAG 
CAGGTGCGCT GGCCGGTGGA GCGCAGCACG TGGACCTCGG CCGCCGTGAT CCTGGCGGTG 
GACGCGCTCA CCGGGACCAC ACCGGGCTCG CGGGTCTTCC TGCACACCTG GGACGGGGAC 
CCCGCCGACT AG
 
Protein sequence
MSVTPAPAPT AGPAPHDALS LPGVLDAGQL HRSASYLARC QEDGGAIPWF PGGHTDVWDH 
VECAMALTVT GRSAPGHAEA ARRAYLWLAD SRAPGGGWPA KFRQGVPVTR LREANHAAYP 
AVGLFHHLLV TGDTAFAERM WPVVEEGLEF VLALRGEHGE ILWARSENGA PGDHALLTVC 
ASVHHALRCG AALAARLGRS RPAWTAAADR LAVLINGHED LFADRGRFSM DWFYPVLGGA 
VRGAAAKERI AERWDRFVVP GLGVRCVSDQ PWVTAAETSE LVLALAAVGD VDAGVRLLRD 
VQHLRDADDG AYWTGYQFAE QVRWPVERST WTSAAVILAV DALTGTTPGS RVFLHTWDGD 
PAD