Gene Ndas_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0348 
Symbol 
ID9244183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp423809 
End bp424663 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content72% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003678302 
Protein GI297559328 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0113875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.835777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCG CGACCGACCG CACTCCCACC GACCCCGCCG TGCCGGCCCC CTCCGGACGC 
CTGCCCGGCG CGCTGCGCGT CGGGCTGTCC CGGGGCTGGC TGGAGGTCCG CGAGTTCACG 
CACGAGTGGG AGAGCGTGAT CTTCACCTTC TCCCTGCCCG CGCTGATCCT GGTCATGTTC 
TCGTCGATCT TCGACGGCAT GTTCGACATG GGCATGCCCG CCGTGGACTA CTACCTGCCG 
GGCCTGGTGG CGATGGGCCT GATGTCGGTC AGCTTCCAGC AGCTGGGCCT GGGCATCGCC 
AACGAGCGCG AGCGGGGCGG TCTGCGCCGC CTGCGCGGCA CGCCGATGCC CCCGACCGCC 
TACTTCGTCG GCAAGACCGT GGTGGTGCTG TTCCTGGCCC TGGGCCAGCT GGTCCTGCTG 
CTGGGCGTGG CCGTCCTGGC CTTCGGGGCG CGCATGCCCG ACGGGCCCGC CGCCTGGGCG 
ACGCTCGGGT GGGTGTTCGT GCTGGGCACC GTCTCCTGCT CGCTGCTGGG CATCGCGGTC 
AGCTCCCTGG CCCGCAACGT CCGCTCCGCC TCCGGCATCG TGGTCGTGCC CTTCCTGATC 
CTGCAGTTCA TCTCGGGGAT CTTCGTGCCC GTCGTCGCCC TGCCCGACTG GGTGCTCGAC 
GCCGCCGCGC TCTTCCCGCT GATGTGGATG GCGCAGGGCC TGCGCGCGGC GTTCTTCCCC 
GCCGAGATGG CCGCCCTCGA ACCCGGCGGT TCGTGGGACC TGTCCGGGGT CGCCCTCGCG 
CTGGGCGTGT GGTGTGTGGT GGGCTTGGCG CTGGTACTGC TGACGTTCCG GTGGAAGACG 
CGGAAGGACG GGTGA
 
Protein sequence
MSTATDRTPT DPAVPAPSGR LPGALRVGLS RGWLEVREFT HEWESVIFTF SLPALILVMF 
SSIFDGMFDM GMPAVDYYLP GLVAMGLMSV SFQQLGLGIA NERERGGLRR LRGTPMPPTA 
YFVGKTVVVL FLALGQLVLL LGVAVLAFGA RMPDGPAAWA TLGWVFVLGT VSCSLLGIAV 
SSLARNVRSA SGIVVVPFLI LQFISGIFVP VVALPDWVLD AAALFPLMWM AQGLRAAFFP 
AEMAALEPGG SWDLSGVALA LGVWCVVGLA LVLLTFRWKT RKDG