Gene Ndas_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0121 
Symbol 
ID9243952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp149539 
End bp150807 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content68% 
IMG OID 
Productintegrase family protein 
Protein accessionYP_003678077 
Protein GI297559103 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.534504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTGG TCGACACCTG GCACAAGACC GTCAAGCTCC CGGACGGCTC CGCCCGGCGC 
GAGAAGTCCG CCTCCTACGG CCGCGGCAAG CGCTGGGCCG CTCGCTACCG GGACAGCAAC 
GGACAGCAGA AGTCCCCGAA GTTCAGGACC AAGCCCGAAG CCGAACGCCA CCTCAAGAAG 
GTGGAGGGGG AACTTGCGCG GGGTCTCTAC GTCGATCCCA GCGCCGGACA GGTCACCCTC 
AAGGAGTTCG CGGAAGACGT GGTCAAGAAC GCTTCCGTGG AGGAGTCCAG CCGCCACGAC 
CTGGAGCGCC GCTTTCGCAA GCACGTGTAC CCGTTCCTCG GGGGCAGCCA GCTCCGCGCC 
ATCCGGCCAT CGATGATCCA GGAGTGGATC AAGGGCCGCT CCGCCGAACT CGGAGACCAG 
ACCGTGCGGA CCGTCTTCGA CAACCTGTCG ATGGTCTTCC AGGCCGCCGT GGACGACGAA 
CTCATCGCCC GCAACCCGTG CCGCGCTGGC TCCGTCAAGC CTCCGTCAGT GACTCGCCGG 
AAGGTGATCC CGTGGTCGGT CGAACTCGTC TCGGGGATCC GGTCCGCCCT GCCCGCTCGC 
TATCAGGCCC TGGTGGTCCC CGGTGCGGGA TGCGGCCTGC GGCAGGGTGA AGTCCTGGGC 
CTGGCCGTCG ATGACCTGTC CGCCTCGAAG CACACGCTGC ACGTCCGGCG ACAGGTGAAA 
CTCATGGCGG GGAAGCCGGT GTTCGCTCCT CCCAAGGGCG GCAAGGAGCG AGAGGTTCCC 
CTCCCCGGCC ACGTGCTGTC CGCTCTGGCC GCTCACATGG AGCGCTTCCC GCCCGTGGCG 
GTGACGCTCC CCTGGAAGCA CTTCGGGGGC AAGCCGGTGA CGGTCAGCCT GATCTTCACC 
AGCCGGGAGA GGAAGGCGCT GAACGCGACC TACGTCAACG CCTATCTGTG GAAACCGGCC 
CTGGTGGCTG CTGGCGTCCT GCCCGCGCCT CCTGCCGGTG AGCGCATCCA GGCGGCCCAT 
GACAAGGGCT TCCACCAACT GCGCCACCAC TACGCCAGTG TGATGCTGGA CTCAGGGGTG 
AGCGTTCGGG CGCTGGCTGA CTTCCTCGGA CACCACGACC CCGGGTTCAC CCTGCGGACC 
TACGCGCACA TGATGCCGAA GAACGAGGAA CGGGCTCGGG AAGCCATCGA CCGTGCCTGG 
TCCGCAGTCG ATGGCCTCCG CTCCCCGTGT GCGCCCGATG TGCGCCCGTC CGACAGCCAG 
GGTTCCTGA
 
Protein sequence
MPVVDTWHKT VKLPDGSARR EKSASYGRGK RWAARYRDSN GQQKSPKFRT KPEAERHLKK 
VEGELARGLY VDPSAGQVTL KEFAEDVVKN ASVEESSRHD LERRFRKHVY PFLGGSQLRA 
IRPSMIQEWI KGRSAELGDQ TVRTVFDNLS MVFQAAVDDE LIARNPCRAG SVKPPSVTRR 
KVIPWSVELV SGIRSALPAR YQALVVPGAG CGLRQGEVLG LAVDDLSASK HTLHVRRQVK 
LMAGKPVFAP PKGGKEREVP LPGHVLSALA AHMERFPPVA VTLPWKHFGG KPVTVSLIFT 
SRERKALNAT YVNAYLWKPA LVAAGVLPAP PAGERIQAAH DKGFHQLRHH YASVMLDSGV 
SVRALADFLG HHDPGFTLRT YAHMMPKNEE RAREAIDRAW SAVDGLRSPC APDVRPSDSQ 
GS