| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0076 |
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| Symbol | |
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| ID | 9243907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 97212 |
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| End bp | 99047 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_003678034 |
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| Protein GI | 297559060 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.105438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.388356 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG ACCGCCCCGC TTCCGACCCG CGTCCCGCCT CCGGCGGCGG GTCGCCCCGA
CCGCACCCGC GGCCGGAGGT TCCTCCTGTT CAGGATGGTT CATCCGATGA CAGGACCACG
GGTCTGCCCT TGCGCGGACT GCTGCTGGCC CTGGGCGACC CCGTCGTGGA CGTGGCCGCC
GCCCCGGACG GGCTCGATGT CCAGGTGGAC AACGTCGTCA TCCTCGACCC GGAGGACCGC
ACGGAGGTGC GCGAGGGGGA CCTGGTGCTG CTGATCGGGG CGCGGGGCGC CTCCGCGCGG
CGCCTGGTCA GGGCGCTGGC CGAGCGCGGC GCCACGGCCG TCGCGGTCAA GACCAGCGCG
CACCCGGCGT CGGAGGAGGC GCCGCCGACC GCCGGGACGC GCCCCGGCCG CCCCCGGCCC
GGAGGCGGTG ACGAGGCGCG GGCGCTGCGC ACCGAGGCGC GGGAGGCGGG GATCGCCCTG
CTCGCGGTGC GCCCCGAGGT GCGCTGGGAC CAGTTGCAGT CGGTGTGCCG GTCCATCCTG
GACGAGGCCC GCCTGACCGC CTCGGAGGAC CTGGGCGAGT CCGGCGGCGA CCTGTTCTCC
ATGGCGCAGA CCATCGCCAG GCTCACCGGC GGGCTGGTGA GCATCGAGGA CGCGGCGAGC
CGGGTGCTGG CCTACTCCAG CGGCGCCGAG GTGGACGAGC TGCGGCGGCT GTCGGTGCTG
GGGCGGCGCG GCCCGGAGTC GTACCTGGCG CTGCTGCGCG AGTGGGGGGT GTTCGCCAAG
CTGCGCGCGG GCGAGGAGGT GGTGCGGGTG GAGGAGCACC CCGAACTGGG CATCAGGCGC
CGGTTGGCCG TGGGCATCCA CGCGGGACGC CAGCCGCTGG GCGCGATCTG GGTGCAGGAG
GGCGACCGGC CGCTGGCCGA GCACGCGGAG GAGGCCCTGC TGGGCGCGGC GCGCACCACC
GCGCTGCAGA TGATCCGCCA GCGCACGCAG GCCAGCGCGG GGCTGCGGCT GCGCGAGGAC
CTGCTGTCGA GCCTGCTGGA GGGCAGGATC GACGCCGGAG CGCTGGCCGA CACCGTGGAG
GTGCACGCCG ACCGGGGAGC GCTGGTGGTG GCGTTCGCCC TGGTCGAGGG GTCCGAGGGC
GCGGCTGAGG AGCGCCCCGA CCGGCCCGAG CGCGAGTTGC GCCGACGTCA GCTGATCGAC
CTGGTGTCGG TGCACACCGC GGCCTACCGG CGCAGCGCCC TGGTGACCGC GCTGGGCGGT
CGGGTCTACG TGCTGCTGCC GGACCTGGCG CGCGTCCGGG AGGGGCGGCG CGGGGTGGAG
CGGTCGGTGC TGGCGCTGAC CCGCAAGACG GTGGCGGCGG CGCGCGCGGC GCTGGGACTG
GAGGTGCGCG CGGCGGTGGG GTCGCTGGTG GAGCGGCTGG GGGACGTGCC GGACTCGCGT
GCGGAGGCGG ACCGGGTCCT GGACGCGGTG GAACGCTCTC CCGACCGGGG TCCGGGCTGG
GACGTGGCGA CCATCTCCGA CGTGCGCTCG CGGGTGCTGG TCAGCGAGAC GCTGGCACGG
CTGCGCGAGG ACCCGTCGCT GCGGGACCCG CGGGTGAGCC GGCTGATCGA GCACGACCGC
GCGGGCGGCG CCGACCTGGT GCGCTCCCTG CTGGCCTACC TGGAGGCGTT CGGGGACGCG
CGGGCGGCGG CGGAGCGGCT GCACATCCAC CCGAACACGC TGCGGTACCG GGTGCGCCGG
GCGGCGTCGG TGAGCGGGAT CGACCTGGGG GACCCCGGGG AGCGCCTGTT CACGCAGTTG
CAGCTGTTGA TGGAGCAGCA GGGGCCGACG CGCTGA
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| Protein sequence | MSNDRPASDP RPASGGGSPR PHPRPEVPPV QDGSSDDRTT GLPLRGLLLA LGDPVVDVAA
APDGLDVQVD NVVILDPEDR TEVREGDLVL LIGARGASAR RLVRALAERG ATAVAVKTSA
HPASEEAPPT AGTRPGRPRP GGGDEARALR TEAREAGIAL LAVRPEVRWD QLQSVCRSIL
DEARLTASED LGESGGDLFS MAQTIARLTG GLVSIEDAAS RVLAYSSGAE VDELRRLSVL
GRRGPESYLA LLREWGVFAK LRAGEEVVRV EEHPELGIRR RLAVGIHAGR QPLGAIWVQE
GDRPLAEHAE EALLGAARTT ALQMIRQRTQ ASAGLRLRED LLSSLLEGRI DAGALADTVE
VHADRGALVV AFALVEGSEG AAEERPDRPE RELRRRQLID LVSVHTAAYR RSALVTALGG
RVYVLLPDLA RVREGRRGVE RSVLALTRKT VAAARAALGL EVRAAVGSLV ERLGDVPDSR
AEADRVLDAV ERSPDRGPGW DVATISDVRS RVLVSETLAR LREDPSLRDP RVSRLIEHDR
AGGADLVRSL LAYLEAFGDA RAAAERLHIH PNTLRYRVRR AASVSGIDLG DPGERLFTQL
QLLMEQQGPT R
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