Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0039 |
Symbol | |
ID | 9243866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 50452 |
End bp | 51324 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003677997 |
Protein GI | 297559023 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0187406 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.109217 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCG AGCCCGCCGG ACCCACCGAG CCCGCCGGAC CCACCGAGCC CGCCGGACCC ACCGAGCCCG CCGGACCCAC CGGGACCGCT GTCGCCGAGG CCGTCGCCGC TCCCCCCGCC CCCGGCGCCG TCCCGGTCCT GGCCCTGGAG AACCTGACCT GGTCGGTCGG CGGCGCCCTC ATCGTCGACG ACGTCACCAT GGCCGTGGAC GAGGGAGAGT TCGTCGCACT CATCGGCCCC AACGGCGCGG GCAAGACCTC CCTGTTCAAC CTGGTCTCCG GTCTCACCCG GCCCACCGGC GGCCGTGTCC GCCTCGCCGG GACCGACGTC ACCCGCCACG CGCCCCACCG CCGCGCCCGG CTCGGCATGG GCCGCACCTT CCAGACCTCC AGCGTCTTCG GCGACCTCAC CGTCGGCGCC AACGTCGGCC TGGCCGTCCA GGCCCGCACC GGGGAGTCGC GCCGCTTCTG GCGCCCGGCC ACCCCCGACG GCGGACCCGG GGCCACCGCC GCCCTGGACC TGGTCCGCCT CTCCCACCGG GCCGACGCCC TCGCGGGCGA CCTGTCCCAC GGCGACAAGC GCAAGCTCGA ACTCGCCCTC CTCCTGGCCC GCCGCCCCCG CCTCATCCTC CTGGACGAGC CCATGGCCGG GGTCAGCGCC GGGGAGGTCG GCGAACTCAC CACCGTCATC CGGGACGTGC ACCGCGAACA GGGCTGCACG GTCCTCATGG TCGAACACCA CATGGAGGTG CTCCTCGACA TGGCCGACCG CCTGGCCGTG ATGCACCACG GCGCGCTGCT GGCCCTCACC GACCCGGACT CGGCCATGGC CGACCCCGAG GTGCAGGCCG CCTACCTCGG GGACGGGGCG TGA
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Protein sequence | MATEPAGPTE PAGPTEPAGP TEPAGPTGTA VAEAVAAPPA PGAVPVLALE NLTWSVGGAL IVDDVTMAVD EGEFVALIGP NGAGKTSLFN LVSGLTRPTG GRVRLAGTDV TRHAPHRRAR LGMGRTFQTS SVFGDLTVGA NVGLAVQART GESRRFWRPA TPDGGPGATA ALDLVRLSHR ADALAGDLSH GDKRKLELAL LLARRPRLIL LDEPMAGVSA GEVGELTTVI RDVHREQGCT VLMVEHHMEV LLDMADRLAV MHHGALLALT DPDSAMADPE VQAAYLGDGA
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