Gene Tbis_3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_3548 
Symbol 
ID9170083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp4140681 
End bp4141436 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content74% 
IMG OID 
ProductABC transporter protein 
Protein accessionYP_003654129 
Protein GI296271497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.705683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCC GCCTCCCCCT CGCCCGGCTG ATCGCCGTCG AGGCCAGGCT CTTCCTCCGC 
GAACCCGCCG CGGTGTTCTT CGCCGTCTTC CTCCCCGTGG CCCTGCTGCT GGCCCTCGGC
GCCACGATCC CGGGCTTCCG GGAGCCGGTC CCCGCGCTCG GCGGCAACCG GGTGGTGGAC
GTGCAGCTTC CCGCGATGAT GACCCTGCTG ACGGTGGTGA CGCTCGCGCT CAGCACCCTG
CCGACGGCCC TGGTGGTCTA CCGGGAGCGG GGCGTGCTGC GCCGGATGTC CACCACCCCG
GTACGGCCGG GCACGCTGCT CGCCGCCCAG CTCGTGATCT ATTTCGCCGT TTCGGTCGTC
TCGGTGGCGC TCATCCTGGT GCTGGGCAAC GCGGTCCTCG GCGTGCCCTA CCCGCGGGCG
CTCGGCGCGT TCGCCGGGAG CTACCTGCTC GGCGCGCTGA CCCTGTTCGC CCTGGGGCTG
TGGCTCGCCG CGGTGGCGCC GAACTCCCGG GTGGTCCAGG GGGCGGGTTC GGCGGCGATG
TTCCCGCTGC TGTTCTTCGC GGGCATGTGG CTGCCCCGGC GGCTCATGCC GGAGGTGCTG
CGCCGGATCA GCGATCTCAC CCCCACCGGG GCGCTCGGGC AGCTCTTCAC GGACGCGTTC
GCCGGTCACC CGCCGGAGGC GTTCCACCTC GCCGTGGCGG CCGGTTGGGC CGTGGCCGCC
GGTCTCGCCG CGGCGCGCAT GTTCCGCTGG GAGTGA
 
Protein sequence
MTTRLPLARL IAVEARLFLR EPAAVFFAVF LPVALLLALG ATIPGFREPV PALGGNRVVD 
VQLPAMMTLL TVVTLALSTL PTALVVYRER GVLRRMSTTP VRPGTLLAAQ LVIYFAVSVV
SVALILVLGN AVLGVPYPRA LGAFAGSYLL GALTLFALGL WLAAVAPNSR VVQGAGSAAM
FPLLFFAGMW LPRRLMPEVL RRISDLTPTG ALGQLFTDAF AGHPPEAFHL AVAAGWAVAA
GLAAARMFRW E