Gene Tbis_3274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_3274 
Symbol 
ID9169797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp3827588 
End bp3828265 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative multidrug efflux system transmembrane protein 
Protein accessionYP_003653857 
Protein GI296271225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.668414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.104011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTCCG ATCGGGCCCT GCTCACCGAG GCGCAGGCGA AGGCCCAGGT CAGCCAGGCG 
AAGAGCGCGC TCGCCAAGGC GAAGGAGGCG CTCGCGGGCG TGACCATCAA GGCTCCCGCC
GACGGCACGG TCCTGTCCGT CGCCGGAACC GTCGGCACGC GCTACACCGG CGGGGCCTTC
CTCACCCTCG GCGATCTCGG CGATCTCCAG GTGAAGGCGA TGTTCACCGA GTCCGACATC
CGCTTCCTCA AGGTGGGCCA GCGGGCGGAG GTCACCTTCC CCGCCCGCCC GGGCGCGACG
TACTCCGGGA CGGTCGCCCA CATCGACCCC ACCGCGACCA CGAGCGACCG GCTCGTCCGC
TACGGGGTGA CGATCGCCCT CGACGACCGG CCGGACGGGC TGCTGCTGGG GCAGACCGCG
ACGGTACGGG TGACCACCGC GGAGGCGGAG AACGCCCTCT ACCTCCCGTC ACAGGCCGTG
CGGAAGGTCA CCGGCGACAG GGCGCAGGTG ACCGTGGTGA ACGGTGAGCA CCGGGCCACC
CGCACGGTCG TGATCGGCGT GCGCGGCGAC CGGTACGTGC AGATCGTCTC CGGGCTCGCC
GAGGGCGAGC GGGTGCTGCT ATCGGAGGGG ACGACGTCCG GCGGCTTCCC CGACGAGGGC
TTCCCCGGGG CGGGCTGA
 
Protein sequence
MGSDRALLTE AQAKAQVSQA KSALAKAKEA LAGVTIKAPA DGTVLSVAGT VGTRYTGGAF 
LTLGDLGDLQ VKAMFTESDI RFLKVGQRAE VTFPARPGAT YSGTVAHIDP TATTSDRLVR
YGVTIALDDR PDGLLLGQTA TVRVTTAEAE NALYLPSQAV RKVTGDRAQV TVVNGEHRAT
RTVVIGVRGD RYVQIVSGLA EGERVLLSEG TTSGGFPDEG FPGAG