| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_1883 |
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| Symbol | |
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| ID | 9168377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobispora bispora DSM 43833 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014165 |
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| Strand | - |
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| Start bp | 2176969 |
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| End bp | 2178585 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003652488 |
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| Protein GI | 296269856 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.681572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC CCGCCGCCCG GCCGCAGCCG ACCGCCACCC GATGGTGGCG GGACGCGGTG
ATCTATCAGG TGTACGTGCG CAGCTTCGCC GACGGCAACG GCGACGGCAT CGGCGACCTG
CTCGGCGTGC GCAGCCGGCT GCGCTACCTC GCCGAGCTCG GCGTCGACGC CATCTGGCTC
ACGCCGTTCT ACCCGTCGCC GATGGCCGAC TTCGGGTACG ACGTGATGGA CTACCGCGAC
GTCGACCCGA TCTTCGGCAC GCTCGCCGAC GTCAAGGCGC TCATCGCCGA GGCCCACCAG
CGCGGGCTGC GCGTCATCGT CGACGTGGTC CCCAACCACA CCTCGGACCG CCACCCCTGG
TTCGTCGCCG CGCTGCAGGC CGGCCCCGGC AGCCCGGAGC GGGAGCGGTA CATCTTCCGG
GACGGCAGGG GCGAGTCGGG GGAGCTCCCC CCGAACGACT GGGAGTCCGT CTTCGGCGGG
CCCGCCTGGA CGCGGGTCGC GGACGGGCAG TGGTACCTGC ACCTGTTCGC CCCCGAGCAG
CCCGACCTCA ACTGGGAGCA CCCCGAGGTG CGCGCCGAGT TCGAGGACGT GCTGCGGTTC
TGGCTCGACC TGGGGGTGGA CGGGTTCCGC ATCGACGTGG CCCACGGCAT GGTGAAGGCG
CCCGGCCTGC CGGACGTGGG CTTCCCCGGC CACGTGGAGA TGATCGGCTC CAAGCCGGTG
CCGTTCTTCG ACCAGGACGG GGTGCACGAG ATCCACCGCT CCTGGCGGCG GATCCTCGAC
TCCTACGACG GGGAGCGGAT CGGGGTGGCC GAGGCGTGGG CGCCCTCGCC CGAGCGGCTC
GCCAACTACA TCCGCCCGGA CGAGCTCCAC CAGGCGTTCA ACTTCCACTT CCTCAGCGCC
CCGTGGGACG CGGACACGTT CCGCTGGGTC ATCGACGAGT CGATCCGCAC GGCCTCGATG
GTGGGCGCTC CCACGACCTG GGTGCTCTCC AACCACGACG TCAAGCGGCA CGTGACCCGG
TACGGCGGGG GCGAGGTCGG GCTGCGCCGG GCCCGCGCGG CCGCGCTGCT CGTGCTCGCC
CTGCCCGGCT CCGCCTACAT CTACCAGGGC GAGGAGCTGG GGCTGCCCGA GGTGCTCGAC
CTGCCGGAGG AGGTCCAGCG CGACCCGCAG CGGCTCCGCG GCCCCGGCGC CGGCCGGGAC
GGCTGCCGGG TCCCGATCCC GTGGACCGCC ACGGATGAGC CGCCGTACGG CTTCACGCCG
CCCGGGGTGT ACGAGAGCTG GCTGCCGATG CCGCGCGACT GGCGGGACCT CAGCGTGGAG
GCCCAGCTCA AGGACGAGGG CTCCACGCTC AACCTCTACC GGGCCGCGAT CAGGATCCGG
CGGGAGCACC CCGACCTCGG CGACGGCACG CTCACCTGGC TGGACGCCCC GGCCGGCACC
TTGGCGTTCC GGCGCGGCCG CTCGCTGACC TGCCTGGTGA ACATGACGCC GGAGTGGATC
GAGATCGGCC ACCGGCCCGG TACGCTGCTC CTCGCGAGCC AGCGGCCCGA GGACGCCGGC
GGCGCCGTGC GTCTCGCGCC CGACTCGGCC ACCTGGTGGT CCGCGTCCGA CGCCTAG
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| Protein sequence | MTEPAARPQP TATRWWRDAV IYQVYVRSFA DGNGDGIGDL LGVRSRLRYL AELGVDAIWL
TPFYPSPMAD FGYDVMDYRD VDPIFGTLAD VKALIAEAHQ RGLRVIVDVV PNHTSDRHPW
FVAALQAGPG SPERERYIFR DGRGESGELP PNDWESVFGG PAWTRVADGQ WYLHLFAPEQ
PDLNWEHPEV RAEFEDVLRF WLDLGVDGFR IDVAHGMVKA PGLPDVGFPG HVEMIGSKPV
PFFDQDGVHE IHRSWRRILD SYDGERIGVA EAWAPSPERL ANYIRPDELH QAFNFHFLSA
PWDADTFRWV IDESIRTASM VGAPTTWVLS NHDVKRHVTR YGGGEVGLRR ARAAALLVLA
LPGSAYIYQG EELGLPEVLD LPEEVQRDPQ RLRGPGAGRD GCRVPIPWTA TDEPPYGFTP
PGVYESWLPM PRDWRDLSVE AQLKDEGSTL NLYRAAIRIR REHPDLGDGT LTWLDAPAGT
LAFRRGRSLT CLVNMTPEWI EIGHRPGTLL LASQRPEDAG GAVRLAPDSA TWWSASDA
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