Gene Tbis_1854 details

Gene Information

• Locus tag: Tbis_1854
• ID: 9168348
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobispora bispora DSM 43833
• Kingdom: Bacteria
• Replicon accession: NC_014165
• Strand: -
• Start bp: 2140027
• End bp: 2143491
• Gene Length: 3465 bp
• Protein Length: 1154 aa
• Translation table: 11
• GC content: 70%
• Product: methionine synthase
• Protein accession: YP_003652459
• Protein GI: 296269827

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 40
• Fosmid unclonability p-value: 0.516902
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCGGCA GACCGTCCTT CCGAGAAGCG CTGTCCGAGC GGATCCTGGT CGCCGACGGG 
GCCATGGGGA CGATGCTGCA GTCCTACCAC CCCACCATCG AGGACTTCCA GGGGCACGAG 
GGCTGCAACG ACGTGCTCAA CGTGAGCCGC CCCGACATCG TGCGCTCCGT GCACGACGCC 
TACCTCGCGG CCGGCGTCGA CTGCATCGAG ACCAACACCT TCAACTCCAA CCAGGCCGCG 
CTCGGCGAGT ACGGGATCGC CGACCGGATC TACGAGCTCT CGGAGGCCGG TGCCCGGCTG 
GCGCGGGAAC GGGCCGACCA CTGGTCCACG CCCGACCACC CGCGGTACGT CCTCGGCTCG 
ATGGGGCCGG GGACCAAGCT CCCCACGCTC GGGCATCTGC CGTACGCGCT CCTCCGCGAC 
GCCTACGAGC AGAACGCGGC CGGTCTCATC GCGGGCGGGG TCGACGCGCT GATCATCGAG 
ACCTGCCAGG ACCTGCTGCA GGCGAAGGCC GCGATCGTCG GGGCGAAACG GGCGATCGCC 
AAGGCCGGCC GCGACGTGCC GATCATCGCC CAGGTCACCA TCGAGACCAA CGGGACGATG 
CTGCTCGGGA CCGAGATCGG CGCGGCGCTC ACCTCGCTCG AGCCGCTCGG CATCGACCTG 
ATCGGCCTCA ACTGCGCCAC CGGGCCGGCC GAGATGAGCG AGCACCTGCG CTACCTCGCC 
AAGCACGCCC GGGTGCCGCT CTCGTGCATG CCTAACGCCG GGCTGCCCGA GCTGACGGCC 
GAGGGCGCCC GATACCCGCT CCAGCCGGAG GAGCTCGCCG AGGCCCACGT CACCTTCATC 
CGCGAGTTCG GCCTCTCCCT GGTGGGCGGC TGCTGCGGCA CGACGCCCGA GCACATGCGC 
ACGGTGGTGG AGCGGGTCGC CGGGATGACC CGGTCGGCCC GCCGCCCGCG CCCGGAGGCG 
GGCGCCGCCT CGCTCTACCA GCACGTGCCG TTCCGGCAGG ACACCTCCTG CCTCATGATC 
GGCGAGCGGA CCAACGCCAA CGGCTCCAAG GCGTTCCGCG AGGCGATGCT CGCCGGGCAG 
TACGACGAGT GCGTGGAGAT CGCCCGGGCC CAGGCGCGCG ACGGGGCGCA CATGCTCGAC 
CTGTGCGTCG ACTACGTGGG CCGGGACGGC GTCGCCGACA TGAAGGAGCT GGCCTTCCGG 
TTCGCGACCG CCTCGACCCT GCCGATCGTG CTCGACTCGA CCGAGCCCGC CGTGCTCGAG 
GCAGGGCTGG AGATGCTCGG CGGCCGGGCG GTGGTCAACT CGGTGAACTT CGAGGACGGC 
GACGGCCCGG ACTCCCGGTT CACCAAGGTG ATGCGGCTGG TCAAGGAGCA CGGCGCCGCC 
GTGGTCGCGC TCACCATCGA CGAGGAGGGC CAGGCCCGCA CCGCCGAGTG GAAGGTCCGG 
GTCGCCACCC GGCTCATCGA GAAGCTGGTG AACGAGTGGG GCATGCGGCC GGAGGACATC 
CTCGTCGACT GCCTCACCTT CCCCATCGCC ACCGGCCAGG AGGACAGCCG CCGGGACGCG 
CTGGAGACCA TCGAGGCGAT CCGGGAGGTC AAGCGCCGCT ACCCGGACGT GCAGACCACC 
CTGGGCATCT CGAACGTGTC GTTCGGCCTC AACCCGGCCG CCCGGGTGGT GCTCAACAGC 
GTCTTCCTCA ACGAGTGCGT CAACGCCGGG CTCGACTCGG CGATCGTGCA CGCCTCGAAG 
ATCCTGCCGA TGAACCGGAT CCCCGACGAG CAGCGCCAGG TCGCGCTCGA CCTCATCTAC 
GACCGCCGCC GGGAGGGGTA CGACCCGCTG CAGCGGTTCA TGGAGCTGTT CGCCGACGCC 
GACGCCGCGT CCATGACCGC GGGGAAGGCG GCCGAGCTCG CCGCGCTGCC GCTGTGGGAG 
CGGCTCAAGC GGCGGATCAT CGACGGTGAG CGCAAGGGCC TCGAGGACGA TCTCGATGAG 
GCGCTCACCC AGCGGCCCGC CCTCGAGATC ATCAACGACG TCCTCCTCGA CGGCATGAAG 
ACCGTGGGGG ACCTGTTCGG CTCCGGCCAG ATGCAGCTCC CGTTCGTGCT CCAGTCGGCC 
GAGGTCATGA AGAGCGCGGT CGCCTACCTG GAGCCGCACA TGGAGCGGGT CGAGGGCGTC 
TCCAAGGGCC GGATCGTGCT CGCCACGGTC AAGGGCGACG TGCACGACAT CGGCAAGAAC 
CTCGTCGACA TCATCCTGTC GAACAACGGG TACGAGGTGA TCAACCTCGG CATCAAGCAG 
CCCATCTCCG CCATCATCCA GGCCGCCGAG GAGAAGCAGG CCGACGTGAT CGGCATGTCC 
GGCCTGCTGG TCAAGTCCAC GGTGGTGATG AAGGAGAACC TCGAGGAGCT GAACGCCCGG 
AAGCTGGCGG CCAAGTACCC GGTGATCCTC GGCGGCGCCG CGCTCACCCG CGCGTACGTC 
GAGCAGGACC TCGCCGACAT CTACGAGGGG GAGGTCCGCT ACGCCCGGGA CGCCTTCGAG 
GGGCTCCGCC TCATGGACGC GATCATGGCG GTGAAGCGCG GGGAGAAGGG CGCGTCGCTT 
CCCCCGCTCC GCACCCGCCG GGTGAAGCCC GGGGCCGTGC TCCGGCGCAC CCCGGCCGAC 
GAGCTGCCCC GGCGCTCCGA CGTGGCCACG GACAACCCGA TCCCCCGGCC CCCGTTCTAC 
GGCGACCGGG TGGTCAAGGG CATCCCGCTC GCCGACTACG CGGCGTTCAT CGACGAGCGG 
GCGCTCTTCA TGGGCCAGTG GGGGCTCCGG CCGAGCCGCG CCGAGGGCGG CCCCTCGTAC 
GAGGAGCTCG TCGAGACCGA GGGCCGGCCA CGGCTGCGGA TGTGGCTGGA GCGGCTCCAC 
ACCGAGAACC TGCTCGAGGC CGCGGTCGTC TACGGCTACT TCCCCTGCGT GAGCGAGGGC 
GACAGCCTGA TCATCCTCGA TGAGGACGGC GGGGAGCGGC TCCGGTTCAC CTTCCCGCGC 
CAGCGCCGGG ACCGGCACCT GTGCCTCGCC GACTTCTTCC GGCCGCGGGA GTCCGGGGAG 
GTGGACGTGG TCGCCTTCCA GGTGGTCACC GTGGGCCACC GCATCGGGCG GGCAACGGCC 
GAGCTGTTCG GCAAGGACGC CTACCGGGAG TACCTGGAGC TGCACGGGCT CTCGGTCCAG 
CTCACCGAGG CGCTCGCCGA GTACTGGCAC GCGCGGGTCC GCTCCGAGCT CGGCATCGGC 
GGCGACGAGT CGCTCGAGGA CATGCTCAAG GTGAACATCA CCGGGTGCCG GTACTCGTTC 
GGTTACCCGG CCTGCCCGAA CCTGGAGGAC CAGGTTCACC TGATGACGCT GCTCGACCCC 
GCCCGGATCG GCGTGACCCT CTCCGAGGAG TACCAGCTCC ACCCCGAGCA GAGCACCTCG 
GCCCTGATCG CCCACCACCC GGAGGCGAAG TACTTCAAGG TCTAG 

 

Protein sequence

MTGRPSFREA LSERILVADG AMGTMLQSYH PTIEDFQGHE GCNDVLNVSR PDIVRSVHDA 
YLAAGVDCIE TNTFNSNQAA LGEYGIADRI YELSEAGARL ARERADHWST PDHPRYVLGS 
MGPGTKLPTL GHLPYALLRD AYEQNAAGLI AGGVDALIIE TCQDLLQAKA AIVGAKRAIA 
KAGRDVPIIA QVTIETNGTM LLGTEIGAAL TSLEPLGIDL IGLNCATGPA EMSEHLRYLA 
KHARVPLSCM PNAGLPELTA EGARYPLQPE ELAEAHVTFI REFGLSLVGG CCGTTPEHMR 
TVVERVAGMT RSARRPRPEA GAASLYQHVP FRQDTSCLMI GERTNANGSK AFREAMLAGQ 
YDECVEIARA QARDGAHMLD LCVDYVGRDG VADMKELAFR FATASTLPIV LDSTEPAVLE 
AGLEMLGGRA VVNSVNFEDG DGPDSRFTKV MRLVKEHGAA VVALTIDEEG QARTAEWKVR 
VATRLIEKLV NEWGMRPEDI LVDCLTFPIA TGQEDSRRDA LETIEAIREV KRRYPDVQTT 
LGISNVSFGL NPAARVVLNS VFLNECVNAG LDSAIVHASK ILPMNRIPDE QRQVALDLIY 
DRRREGYDPL QRFMELFADA DAASMTAGKA AELAALPLWE RLKRRIIDGE RKGLEDDLDE 
ALTQRPALEI INDVLLDGMK TVGDLFGSGQ MQLPFVLQSA EVMKSAVAYL EPHMERVEGV 
SKGRIVLATV KGDVHDIGKN LVDIILSNNG YEVINLGIKQ PISAIIQAAE EKQADVIGMS 
GLLVKSTVVM KENLEELNAR KLAAKYPVIL GGAALTRAYV EQDLADIYEG EVRYARDAFE 
GLRLMDAIMA VKRGEKGASL PPLRTRRVKP GAVLRRTPAD ELPRRSDVAT DNPIPRPPFY 
GDRVVKGIPL ADYAAFIDER ALFMGQWGLR PSRAEGGPSY EELVETEGRP RLRMWLERLH 
TENLLEAAVV YGYFPCVSEG DSLIILDEDG GERLRFTFPR QRRDRHLCLA DFFRPRESGE 
VDVVAFQVVT VGHRIGRATA ELFGKDAYRE YLELHGLSVQ LTEALAEYWH ARVRSELGIG 
GDESLEDMLK VNITGCRYSF GYPACPNLED QVHLMTLLDP ARIGVTLSEE YQLHPEQSTS 
ALIAHHPEAK YFKV