| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_1685 |
|---|
| Symbol | |
|---|
| ID | 9168179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | - |
|---|
| Start bp | 1950995 |
|---|
| End bp | 1953007 |
|---|
| Gene Length | 2013 bp |
|---|
| Protein Length | 670 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | penicillin-binding protein 2 |
|---|
| Protein accession | YP_003652291 |
|---|
| Protein GI | 296269659 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.361275 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.0578136 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCACC GATCGCGCCT GCTCCTCGTC CACGTGCTCG TCGCCTGCAT GTTCCTCGTG
CTCCTCGGCC GCCTCTGGCA GGTGCAGATC ATCGACGGCG ACCGGTACGC CCGCGCGGCC
GTCGAGGACC ACACCCGCCA GGTCGTCCTC CCGGCCGTGC GCGGGCAGAT CGTCGATCAG
CGCGGCCGCC CGCTGGTGCG CAACCGCACG GCGATGACGG TGTCCGTGGA CTACATCACC
CTCTCCCGCC GGCCGGACAA CGGGCGCGCC GTGCTGCGCC GGCTCGCCCG CCTGCTCGGC
ATGCCCTACC GGGAGATCGC CCGCAAGGTG CGGCTCTGCG GGCCGAAGGT GGGCAAGCCG
TGCTGGGCCG GCTCGCCGTA CCAGCCGATC CCGGTCGCCG AAGGGGTCGA CGAGCGGATC
GCGATGCAGA TCGTCGAGCG CCCCGAGGAG TTCCCCGGGG TCACCGCCGA GCTCCAGCCG
GTCCGGGACT ACCCCGAGGG CGGCCTCGCC GCGCACGTGC TCGGCTACGT CGGCCCCGAC
AGCACCCGGG GCGGCGGGCC GTACGGCGTC CGGTTCGTCG GCCGCGACGG GCTGGAGGCG
AGCTACGACG CGGAGCTGCG CGGGCGGGAG GGCAGCCGGC AGCTCGTGGT GGACAGCGCC
GGCCAGGTGC TGCGGGTCGT GCGCGAGGAG CCGCCCCAGC CCGGGGCGAC GCTGGTGACC
AGCATCGACG CCAAGGTGCA GCGGGTCGTG GAGAAGGCGC TCGAGCGGGC CGTCCGGAAG
ACCCGCCCCG CGTCCGCGCG CTCCGGCGCC GCGGTGGTCA TGGACGTCCG CACCGGCCGT
GTGGTCGCCA TGGCCGCCTA CCCCTCCTAC GACCCGTCCG TGTGGACCGG CGGCATCCGC
CCGGCCGACT ACAAGCGGCT CACCAGCGCC GCGCACGGCC AGCCGCTGGT CTCCCGGGCG
ATCCAGGGGC AGTGGCCGCC CGCCTCAACC TGGAAGATCG TCTCGCTCGC GGCGGCGGTG
GACGCCGGCT ACGACCTGTA CGGCCGGTAC GACTGCTCCG GCTCCTACCG GGTCGGCGAT
CGGTCGTTCC GCAACTTCGG CGGGATCGGT TACGGCTTCA TGGACCTGCG CCGCGCCCTC
GTCGTCTCCT GCGACACGAT CTTCTACCGG TTCGCCTACG ACATGTGGGT GAAGGACGAG
CGGGCCAAGC GGCCGGCCGA GCCCATGCAG CGCATGGCCC GCGCCTTCGG GTTCGGCGCC
AAGACCGGGA TCGACCTGCC CGGGGAGGCC GCCGGCCGGG TGCCGGGCCG GGAGTGGAAG
CGCGCCTACT GGGAGCAGAC CAAGGAGGAG ACCTGCAAGG CCGCCAAGAC CGGCTACCCG
TCCCTGGCGA AGACCGATCC GCAGCGGGCC GCCTACCTCA AGGCGGTGGC CGCCGAGCAC
TGCGCCACCG GCTACCTGTG GACCCCGGGC GACGCGGCCA ACTTCTCCAT CGGCCAGGGG
GACGTGCTCG TCACGCCGCT GCAGCTCGCC CGGGCGTACG CCGCGCTCGC CAACGGCGGC
AAGCTGTTCA GCCCGCGGAT CGGCAAGGCC GTGGTCGGCG CCGACGGCCG GGTGCTGCGG
ACCATCACCC CGCCGGTGGT CGGCCGGCTC CCCGTCTCCG GCAAGACCCT CGCCTACATC
CGGGACGCGC TCGCCGAGGT GCCCCGCTCC GGCACCGCCG CCGGGGCGTT CGCCGGGTTC
CCCCTCGACG AGCTGCCGGT CGCCGGGAAG ACCGGGACCG CCGAGGCATA CGGGGTGAAT
GACACCTCCT GGTTCGCCTC GTTCGCCCCG GCCGACAAGC CGAGGTTCGT GGTGGTGGTC
GTGGTCACCC AGGGCGGCGC CGGCGCCGAC GCGGCCGCGC CCGCGGCCCG GGAGATCTGG
TCCGGCATCT ACGGCCTCGA GGGCAAGCGC GCCGCGCTCC CCGGCGGCCG GCTCACCGAC
CGCCTGCCCG ACCTCACCGG AGGGGCCAAG TGA
|
|---|
| Protein sequence | MPHRSRLLLV HVLVACMFLV LLGRLWQVQI IDGDRYARAA VEDHTRQVVL PAVRGQIVDQ
RGRPLVRNRT AMTVSVDYIT LSRRPDNGRA VLRRLARLLG MPYREIARKV RLCGPKVGKP
CWAGSPYQPI PVAEGVDERI AMQIVERPEE FPGVTAELQP VRDYPEGGLA AHVLGYVGPD
STRGGGPYGV RFVGRDGLEA SYDAELRGRE GSRQLVVDSA GQVLRVVREE PPQPGATLVT
SIDAKVQRVV EKALERAVRK TRPASARSGA AVVMDVRTGR VVAMAAYPSY DPSVWTGGIR
PADYKRLTSA AHGQPLVSRA IQGQWPPAST WKIVSLAAAV DAGYDLYGRY DCSGSYRVGD
RSFRNFGGIG YGFMDLRRAL VVSCDTIFYR FAYDMWVKDE RAKRPAEPMQ RMARAFGFGA
KTGIDLPGEA AGRVPGREWK RAYWEQTKEE TCKAAKTGYP SLAKTDPQRA AYLKAVAAEH
CATGYLWTPG DAANFSIGQG DVLVTPLQLA RAYAALANGG KLFSPRIGKA VVGADGRVLR
TITPPVVGRL PVSGKTLAYI RDALAEVPRS GTAAGAFAGF PLDELPVAGK TGTAEAYGVN
DTSWFASFAP ADKPRFVVVV VVTQGGAGAD AAAPAAREIW SGIYGLEGKR AALPGGRLTD
RLPDLTGGAK
|
|---|
| |