Gene Tbis_1624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1624 
Symbol 
ID9168118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1879748 
End bp1880764 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content68% 
IMG OID 
Productperiplasmic binding protein 
Protein accessionYP_003652231 
Protein GI296269599 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.448984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTGT CGCGCAGGGC TCTGTTCGCA CTTGTCGGCG GGCTCGCCAC AGTGCTATCC 
CTCACGGCCT GCGGGGGCGG TGGGGAGACC GCCTCGGCGC CGGCCGCCTC GGCCTCGTCG
AGCGCCTCCT CCGGCCCGTG GAAGTTCACC GATGACCGGG GCAAGACGAT CGAGCTGCCC
TCGACCCCCA CCCGGGTCGT CGCCCAGGTC GGCTCGGCCG CCGCGCTCTG GGACTTCGGC
ATCCGGCCGG TGGGCGTCTT CGGCCCGCAC AAGCTCCCCG ACGGCAGCAA GGACCCGCAG
GTCGGCAACG TCGACATCAC CCAGGTGACC GGCCTCGGCA ACGTCTGGGA CGAGTTCAAC
GTCGAGCAGT ACATCTCGCT CAAGCCGGAC CTGCTCGTGA GCGGCATGTA CGAGGAGGGC
GTCCTCTGGT ACGTGCCGGA GAAGTCCAAG GACGCGATCG AGCAGGTCGC GCCGACCGTC
GGCATCATGC TGACCGGCAA GAGCGCCACC CAGGTGATCG AGAGGTACGC GGAGCTCGCC
CAGTCGCTGG GCGCCGACCT CAACGCGCCC GAGGTGACCC AGGCCAAGGC CCGGTTCGAG
GCGGCGACCG AGGAGCTCAA GAAGATCGGC GCCACCGGGC TGAAGGTGCT GATGATGTCC
GGCGGCCCCG ACACCATGTG GGTGGTCAAC CCGCCCATGT ACCCGGACAT CCTCCACCTG
ACCCAGAACG GCCTGCAGGT GATCACGCCC GACAAGATCG ACGAGGGCGG CTTCTGGGAG
AGCCTGAGCT GGGAGAACGC CGACAAGTAC GAGGCGGACG TCATCCTCTA CGACGCCCGG
ACCCAGGCGC TCACCCTGGA GGACATGAAG AAGAAGCCCA CCTTCGCCAA GCTCCCGGCG
GTCCAGGCCG GCCAGGTGTA CCCGTGGCGC GCCGAGACGC CGTTCAGCTA CCAGGGCTAC
GCCGACTTCC TCGAGGAGCT CGTCAACAAC CTCAAGCAGG CCAAGAAGCT CACCTGA
 
Protein sequence
MPVSRRALFA LVGGLATVLS LTACGGGGET ASAPAASASS SASSGPWKFT DDRGKTIELP 
STPTRVVAQV GSAAALWDFG IRPVGVFGPH KLPDGSKDPQ VGNVDITQVT GLGNVWDEFN
VEQYISLKPD LLVSGMYEEG VLWYVPEKSK DAIEQVAPTV GIMLTGKSAT QVIERYAELA
QSLGADLNAP EVTQAKARFE AATEELKKIG ATGLKVLMMS GGPDTMWVVN PPMYPDILHL
TQNGLQVITP DKIDEGGFWE SLSWENADKY EADVILYDAR TQALTLEDMK KKPTFAKLPA
VQAGQVYPWR AETPFSYQGY ADFLEELVNN LKQAKKLT