Gene Tbis_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1559 
Symbol 
ID9168053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1793815 
End bp1795281 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content68% 
IMG OID 
Productfamily 62 glycoside hydrolase 
Protein accessionYP_003652167 
Protein GI296269535 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.622478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATGC CCTGGCGAGC GCGGTCACCA CGCAGCTCCG CCGCCCCGAC CGCGGCCCTG 
CCCAGGCGGA CTCTGCGCCG CCGCCTCGCG ATCGGCGTCG TTCCCCTTCT GCTGGCCGGA
GCCGGCTGGG TGACGGCGCA GCCCGCCCAG GCCGCCATCG CCTGCCGGGT CGACTATGAG
ATCAGCGCGA GCTGGCCGGG CGGCTTCACC GCCAACGTCA CCATCCACAA CCTCGGTGAC
GCGATCAACG GCTGGCAGCT GACCTGGTCC TTCGGCGCCG GGCAGCAGAT CACCCAGATC
TGGAACGCCA CCCACACCCA GTCCGGCTCG TCGGTCACCG CCACCAACGT CTACTACAAC
GCCGACATCC CCAGCGGCGG CAGCGTGAAC TTCGGCTTCA ACGGCTCCTG GACCGGCTCC
AACCCGGCGC CCACCTCGTT CGCGCTGAAC GGTGTGCCCT GCACCGGCGG CCCGGGCACG
CCTCCTCCGT CCCCGACCCC GTCGTCCACC CCGTCCCCGA CGCCGTCGGT CACCCCGTCG
CCGACGCCGT CGGTCACCTG CGACCTGCCG TCGCAGTACC GGTGGACGTC GACGGGCCCG
CTGGCGAACC CGAGGTCGGG GTGGGTCTCG CTCAAGGACT TCACCAACGT CGTCTACAAC
GGCAAGCACC TGGTCTACGC GACGACGCAC GACACCGGAA CGCGATGGGG GTCGATGATG
TTCGACCCCT TCACGAACTG GTCGGACATG GCGACGGCCC GCCAGATCGA GACGCCCTTC
TCCGCCGTCG CGCCCACGCT GATCTACTTC GCCCCGAAGA ACATCTGGGT GCTCGCCTAC
CAGTGGGGCC GGTACCCCTT CTCGTACCGG ACCTCCACCG ATCCGAGCAA CCCGTACAGC
TGGTCGGAGG AGCAGCCCCT GTTCACCGGG AGCATCTCCG GTTCCGCGAC GGGGCCCATC
GACCAGACGC TGATCGGCGA TGACAAGAAC ATGTACCTGT TCTTCGCCGG GGACAACGGC
AAGATCTACC GGGCGAGCAT GCCCATCCAG AACTTCCCCG GCAACTTCGG CTCGTCCGCG
ACGGTGGTCA TGAGCGACTC GACCTACAAC CTGTTCGAGG GGGTCGAGGT CTACACGCTC
AAGGGCCAGA ACAAGTACCT CATGCTCGTC GAGGCGATCG GCTCGCAGGG GTGGCGTTAC
TTCCGCTCCT TCACCGCCAC CAGCCTGGAC GGCACGTGGA CGCCGCAGGC CGCGACCGAG
AGCAACCCGT TCGCGGGCAA GGCCAACAGC GGCGCCACCT GGACCAACGA CATCAGCCAC
GGCGATCTGG TGCGCACCAA CCCCGACCAG ACCAAGACCG TCGATCCGTG CAACCTGCAG
CTGCTCTACC AGGGACGCGC CACCAACTCC GGCGGGGACT ACGACCTTCT GCCGTACCGG
CCGGCCCTGC TGACGCTGCA GCGCTGA
 
Protein sequence
MRMPWRARSP RSSAAPTAAL PRRTLRRRLA IGVVPLLLAG AGWVTAQPAQ AAIACRVDYE 
ISASWPGGFT ANVTIHNLGD AINGWQLTWS FGAGQQITQI WNATHTQSGS SVTATNVYYN
ADIPSGGSVN FGFNGSWTGS NPAPTSFALN GVPCTGGPGT PPPSPTPSST PSPTPSVTPS
PTPSVTCDLP SQYRWTSTGP LANPRSGWVS LKDFTNVVYN GKHLVYATTH DTGTRWGSMM
FDPFTNWSDM ATARQIETPF SAVAPTLIYF APKNIWVLAY QWGRYPFSYR TSTDPSNPYS
WSEEQPLFTG SISGSATGPI DQTLIGDDKN MYLFFAGDNG KIYRASMPIQ NFPGNFGSSA
TVVMSDSTYN LFEGVEVYTL KGQNKYLMLV EAIGSQGWRY FRSFTATSLD GTWTPQAATE
SNPFAGKANS GATWTNDISH GDLVRTNPDQ TKTVDPCNLQ LLYQGRATNS GGDYDLLPYR
PALLTLQR