Gene Tbis_1420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1420 
Symbol 
ID9167912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1604248 
End bp1605180 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content72% 
IMG OID 
Productpseudouridine synthase, RluA family 
Protein accessionYP_003652031 
Protein GI296269399 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.276517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGAGC AGCGGAGCCT TCCGGTACCT GAGGGTCTGG AGGGGGAGCG GCTCGACGCC 
GCGTTGTCCC GGTTGTTCGG GTTCTCCCGT ACCCGCGCCG CCGACCTGAT CGCCGCCGGG
GACGTCCTCG TGGACGGCGC GGTGCCGTCC AAGTCCGATC GGCTGCGCGC GGGGCAGTGG
CTCGACGTGA CGATCCCCCC GCCCCCGGCC CCGCCCGCGC CCCGGCTGGA GCCGATCCCC
GGCATGTCGA TCCTCTACGA GGACGAGGAC ATCATCGTGA TCAACAAGCC GGCGGGCGTG
GCCGCGCACC CCACCGTGGG CTGGACCGGC CCGACCGTGC TCGGCGGGCT CCTGGGCGCC
GGCCACCGGG TGTCCACCAG CGGCGCGGCC GAGCGGCAGG GGATCGTCCA CCGGCTCGAC
GCGAACACCA CGGGCGCGAT GGTCGTCGCC AAGAGCGAGC TGGCGTACGC CCGGCTCAAG
CGCGCGTTCA AGGAGCGCAA GGTCGAGAAG CGCTACCACG CGATGGTGCA GGGGCACATG
GACCCGCTGC GCGGCACCAT CGACGCCCCG ATCGACCGCC ACCCCTCCGG GGACGGCCGG
TTCGCGGTGG TCGCCGGCGG CAAGGAGGCC ATCACCCACT ACGACACGAT CGAGGCGTTC
CGGGCGGCCT CCCTGCTCGA CGTCAAGATC GAGACGGGCC GCACGCACCA GATCCGGGTG
CACCTGTCCG CGCTCGGGCA CCCGTGCGTC GGCGACTTCA TGTACGGCGC CGACCCCACG
CTCGCGGCGA AGCTGGGTGT GAACCGGCAG TGGCTGCACG CCATCACGCT CGCCTTCGAG
CACCCGGTGA CGGGGGAGTG GATGTCGTTC ACCGCCGAGT ACCCCGACGA CCTGGCCCGC
TCGTTAAAGA TCATTTCGGA CGAGAACGCC TGA
 
Protein sequence
MGEQRSLPVP EGLEGERLDA ALSRLFGFSR TRAADLIAAG DVLVDGAVPS KSDRLRAGQW 
LDVTIPPPPA PPAPRLEPIP GMSILYEDED IIVINKPAGV AAHPTVGWTG PTVLGGLLGA
GHRVSTSGAA ERQGIVHRLD ANTTGAMVVA KSELAYARLK RAFKERKVEK RYHAMVQGHM
DPLRGTIDAP IDRHPSGDGR FAVVAGGKEA ITHYDTIEAF RAASLLDVKI ETGRTHQIRV
HLSALGHPCV GDFMYGADPT LAAKLGVNRQ WLHAITLAFE HPVTGEWMSF TAEYPDDLAR
SLKIISDENA