| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_1078 |
|---|
| Symbol | |
|---|
| ID | 9167568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | - |
|---|
| Start bp | 1223095 |
|---|
| End bp | 1223832 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_003651693 |
|---|
| Protein GI | 296269061 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.358733 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.00355085 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAATT CCGATCCGGT TTATCTGCGC GTGGTGGAAG ATCTGCGCCG GCAGATCATC
GACGGCACGC TTCCCCCGGG CGCGCCGATC CCGTCGCGCC ACCAGATCAC GCGGAAGTAC
AGCGTCGGCG AGACCGCGGC CCGGCACGCG CTCCGCGTGC TCGCCCAGGA AGGCCTGATC
ATCGGCCGGG TGAGCTCGGG GCACCGCGTG CGCGAGAAGC CGATCCTCTT CCCCCTCCAC
CGCGACCGTC ACGCCGACCC CCAGGCGGCC TTCGTCGCGG ACATGCAGGC CCTCGGCCTC
AAGCCCACCT GGACCTGGCG GAGCGAGCTC GCCGATCCGC CACCGGAGGT CGCCAAGCGC
CTCCGGCTCC CCGAACCGGT CCCGGTGATC AAGGTCAGCT TCGTGTTCCG CGGCGACGAC
CGCCCGATGC AGCTCCTCAC CGTGTACGAG CCGACCGAGT TCGGGCAGAG CCAGGCTCCG
GAAGAGGGGA CGGCCGAGCG CGTCGGCGCC GCCGCCCGGC TGGCGGCCGC GGGCACGCCG
GTCGACGAGA TCAGCGAGAG CGTCTACATC CGGGTGCCCC AGCCGGGCGA GAGCGACCTG
CTCCAGCTCC CCACCGGGGT CCAGGTCATG CAGGTGGAGC GCACCTACTG GGCCGGTGGG
CGCCCGGTGG AGACCCACGA CCTCGTGGTC CCCGGTGACC GGTTCCGCCT GGTCTACGGC
ATTCCGGCCC GCCCGTGA
|
|---|
| Protein sequence | MANSDPVYLR VVEDLRRQII DGTLPPGAPI PSRHQITRKY SVGETAARHA LRVLAQEGLI
IGRVSSGHRV REKPILFPLH RDRHADPQAA FVADMQALGL KPTWTWRSEL ADPPPEVAKR
LRLPEPVPVI KVSFVFRGDD RPMQLLTVYE PTEFGQSQAP EEGTAERVGA AARLAAAGTP
VDEISESVYI RVPQPGESDL LQLPTGVQVM QVERTYWAGG RPVETHDLVV PGDRFRLVYG
IPARP
|
|---|
| |