| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_1055 |
|---|
| Symbol | |
|---|
| ID | 9167545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | + |
|---|
| Start bp | 1197565 |
|---|
| End bp | 1199307 |
|---|
| Gene Length | 1743 bp |
|---|
| Protein Length | 580 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | prolyl-tRNA synthetase |
|---|
| Protein accession | YP_003651670 |
|---|
| Protein GI | 296269038 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0165887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.0425214 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCTGC GCATGTCGAC GCTGTTCCTG CGCACACTGC GTGAGGATCC GGCGGACGCG
GAACTGCCGA GTCACAAGCT GCTCGTGCGC GCCGGGTACA TCCGCCGGGT CGCGCCCGGC
GTCTACTCCT GGCTGCCGCT CGGCAAGATC GTGCTGGAGA ACATCGCGCG GGTCGTGCGC
GAGGAGATGG ACCGGATGGG CGCCCAGGAG GTGCTGTTCC CGGCCCTGCT GCCCCGCGAG
TACTACGAGG CGACCGGCCG GTGGACCGAG TACGGCGACA CCCTGTTCCG GCTGAAGGAC
CGCAAGGGCG CCGACTACCT CCTCGGGCCC ACCCACGAGG AGATGTTCAC CGACATGGTC
AAGGGGGAGC TCTCCTCGTA CAAGGACTTC CCGGTCACGC TCTACCAGAT CCAGACGAAG
TACCGGGATG AGGCGCGGCC CCGGGCCGGC CTGCTGCGGG CCCGCGAGTT CGTCATGAAG
GACTCCTACT CCTTCGACCT CGACGACGAC GGGCTCAAGC GCTCCTACGA GGCGCACCGG
GAGACCTACA TCCGGATCTT CGACCGGCTC GGCCTCGACT ACCGGATCTG CTTCGCGGTC
TCGGGTGCGA TGGGCGGCTC GGCCTCCGAA GAGTTCCTCG CGCCCTGCCC GAACGGGGAG
GACACGTTCG TCGCCTGCCA CGGCTGCGGC TACGCCGCCA ACGCCGAGGC GGTGGTCACC
CCGGCGCCGC CGGCGGTGAC CGCCGAGCAC CCGCCGATGC AGGTCCTCGA CACGCCGGAC
ACCCCGACGA TCGAGACGCT CGTCAGCTAC GTCAACGAGC ACTACGGGCT CGGCATCACC
GCGGCCGACA CGCTGAAGAA CGTCGTGGTC AAGGTGCGCA CGCCGGGCTC GGACGAGGTC
AAGGTCGTCG TGATCGGCGT GCCCGGCGAC CGCGAGGTCG ACATGAAGCG CCTGGAGGCG
GCGCTCGCCC CCGGGGTGCC GGAGATCTTC ACGGCGGAGG ACTTCGCCGC GCACCCGGCG
CTGGTGCGCG GGTACATCGG GCCGCAGATC CTCAAGTCGC TCGGCATCAC CTACCTCGTC
GACCCGCGGA TCGTGCCGGG GTCGGCGTGG GTGACCGGGG CGAACCAGCC GGGCAAGCAC
GCCGCCCACG TGGTCGCCGG CCGGGACTTC CAGCCGGACG GAACGATCGA GGCGGCGGAG
ATCAAGCCGG GGGACGCCTG CCCCCGCTGC GGCGGCCCGC TCTCCATCGA CCGCGGCATC
GAGATCGGGC ACATCTTCCA GCTCGGCCGC AAGTACTCCG ACGCCGCGGG GCTCGACGCG
CTCGGCCCGG ACGGCAAGCC GATCCGGATC ACCATGGGCT CGTACGGCAT CGGCGTCTCC
CGCCTGGTCG CGGTCATCGC CGAGCAGAGG CACGACGAGC TCGGCCTGGT GTGGCCGCGC
GAGGTCGCCC CGGCGGACGT GCACATCGTC GGCACCGGCA AGGAGAACCA GATCGAGGTC
GCGGTCGAGC TCGCCGAGAC GCTCGAGTCG CGCGGCCTGC GCGTGCTGGT CGACGACCGG
CCCGGTGTCT CGCCCGGGGT GAAGTTCAAG GACGCCGAGC TGCTCGGCAT GCCGACCATC
GTGATCGTCG GCCGTGGGCT CGCCAACGGC GTGCTGGAGC TGCGCGACCG GGCGAGCGGG
GCACGGGAGG AGATCCCGCT CGGCGAGGCC GCCGACCGGA TCGTCGCCGC CTGCCGCGGC
TAG
|
|---|
| Protein sequence | MLLRMSTLFL RTLREDPADA ELPSHKLLVR AGYIRRVAPG VYSWLPLGKI VLENIARVVR
EEMDRMGAQE VLFPALLPRE YYEATGRWTE YGDTLFRLKD RKGADYLLGP THEEMFTDMV
KGELSSYKDF PVTLYQIQTK YRDEARPRAG LLRAREFVMK DSYSFDLDDD GLKRSYEAHR
ETYIRIFDRL GLDYRICFAV SGAMGGSASE EFLAPCPNGE DTFVACHGCG YAANAEAVVT
PAPPAVTAEH PPMQVLDTPD TPTIETLVSY VNEHYGLGIT AADTLKNVVV KVRTPGSDEV
KVVVIGVPGD REVDMKRLEA ALAPGVPEIF TAEDFAAHPA LVRGYIGPQI LKSLGITYLV
DPRIVPGSAW VTGANQPGKH AAHVVAGRDF QPDGTIEAAE IKPGDACPRC GGPLSIDRGI
EIGHIFQLGR KYSDAAGLDA LGPDGKPIRI TMGSYGIGVS RLVAVIAEQR HDELGLVWPR
EVAPADVHIV GTGKENQIEV AVELAETLES RGLRVLVDDR PGVSPGVKFK DAELLGMPTI
VIVGRGLANG VLELRDRASG AREEIPLGEA ADRIVAACRG
|
|---|
| |