Gene Tbis_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1000 
Symbol 
ID9167487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1126635 
End bp1127801 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content74% 
IMG OID 
Productradical SAM enzyme, Cfr family 
Protein accessionYP_003651616 
Protein GI296268984 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.189733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.570497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGC ACCCCGACAG CGGCCTGCCC GGCAACCGGC CGCCGGCACC CGTGCGGCTG 
ACCTTGACCG CGCCCCGCCG CGCCAAGCCG CCCCGCCACC TCGCCGACCT CACCATGGCC
GAACGCCGGG ATGCGGTGGC CGAACTGGGG GAGAGGCCGT TCCGCGCCGA CCAGCTCTCC
CGGCACTACT TCGGCAGGCT CACCGCCTCG CCCGAGCAGA TGACCGATCT GCCCGGCGGG
AGCCGCGACC GGCTGGTGAG CGCCCTGCTG CCGCCGCTGC TCACCCCGGT CCGGGAGCTC
GCCTGTGACG GCGGCACCAC GCGGAAGACC CTCTGGCGGC TGTTCGACGG CGCGCTCGTC
GAGTCCGTGC TGATGCGCTA CCCCGACCGC ACCACCATCT GCGTCTCCTC GCAGGCGGGG
TGCGGCATGA ACTGCCCGTT CTGCGCCACC GGCCAGGCCG GGCTGACCCG GAACCTCTCC
ACGGCCGAGA TCGTCGAGCA GGTCGTCGCC GGGGCCCGGT CGCTCGCCAA GGGCGAGGTG
CCGGGCGGGC CGGGCCGGAT CAGCAACGTG GTCTTCATGG GCATGGGCGA GCCCATGGCG
AACTACAAGG CCGTGGTGGC CGCGATCCGC CGGCTCACCT CCCCGGTCCC CGAAGGGCTC
GGCATCTCGG CCCGCGGCAT CACGGTCTCC ACCGTCGGTC TCGTTCCCGC CATCGAACGG
CTGGCCCAGG AGGGCCTCCC CGTGACGCTC GCCGTCTCGC TCCACGCGCC CGACGACGAG
CTGCGGGACA CCCTCGTGCC GATCAACACC CGGTGGAAGG TGGCCGAGGT GCTCGACGCG
GCCTGGAACT ACGCGGCCGT CACCAAGCGG CGGGTGTCCA TCGAGTACGC CCTGATCAGG
GACATCAACG ACCAGGAGTG GCGCGCGGAC CTGCTCGGCC GGCTGCTCCA GGGCAGGCTC
GCGCACGTCA ACCTGATCCC GCTCAACCCC ACCCCGGGCT CCCCGTGGAC GGCCTCGCGG
CCGCGGGACG AGCGGGCGTT CGTCCGCCGC CTGGAGTCGT ACGGCATCCC CGTCACGGTA
CGGGACACCC GGGGCCGGGA GATCGACGGC GCCTGCGGCC AGCTCGCGGC GCGGGACCGG
GAGGACCGGA AGGCCGGGGC CCGCTGA
 
Protein sequence
MSEHPDSGLP GNRPPAPVRL TLTAPRRAKP PRHLADLTMA ERRDAVAELG ERPFRADQLS 
RHYFGRLTAS PEQMTDLPGG SRDRLVSALL PPLLTPVREL ACDGGTTRKT LWRLFDGALV
ESVLMRYPDR TTICVSSQAG CGMNCPFCAT GQAGLTRNLS TAEIVEQVVA GARSLAKGEV
PGGPGRISNV VFMGMGEPMA NYKAVVAAIR RLTSPVPEGL GISARGITVS TVGLVPAIER
LAQEGLPVTL AVSLHAPDDE LRDTLVPINT RWKVAEVLDA AWNYAAVTKR RVSIEYALIR
DINDQEWRAD LLGRLLQGRL AHVNLIPLNP TPGSPWTASR PRDERAFVRR LESYGIPVTV
RDTRGREIDG ACGQLAARDR EDRKAGAR