Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbis_0880 |
Symbol | |
ID | 9167366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobispora bispora DSM 43833 |
Kingdom | Bacteria |
Replicon accession | NC_014165 |
Strand | + |
Start bp | 1003960 |
End bp | 1004775 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | polysaccharide deacetylase |
Protein accession | YP_003651497 |
Protein GI | 296268865 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGTCGT GGATCAAGAA GGCGTCGACG GTCTCCCTCG CCGCGGCGCT CGCCGCCGGC ATTCCGGCGG CCGCCTCCGC CGAGCCGGCG GCCGCGAGGC AGACGGTGGT CGCCCTCACC TTCGACGACG GCACCGCCGA TCACGCCCGA GTCGCCAAGA TGCTCCGCGA ACGCGGGCTG CGGGGGACGT TCTACGTCAA CAGCGGCCGG CTCGGCCGGC GCGGCTACCT CACCGCGGCC GACCTGCGGT CCATGGCGAA GGCCGGGCAC GAGATCGGCG GCCACACCAG GGAGCACGTC CGCCTCGCCC ACCTCAGCCC CGACCAGCAG CGGCGCCAGA TCTGCGAGGA CCGGCGGGCG CTGTTCCGCC TCGGCCTCAA GGTGCGGTCG TTCGCCTACC CGTTCGGCAA CTTCGACCAG ACGAGCCGCG AGCTCGCCAT GTACTGCGGG TACACCTCGG CGCGCGGCAT CAACGGCCTC TACCGGCCGG ACACCTGCCG GTCCTGCCCG TACGCCGAGA CGATCCCGCC CGCCGACCTC GCGCTGGTGC GGACCACCTC GCAGACCCGG ATGCCGCGCA CCGCCCGCAA CCTCGCCGCC TCCGTCACCC GGGCCCAGGC GCACGGCGGC GGGCTCGTCA CCTTCGTCTT CCACCGCATC CGGGACGACA AGCGGGACCA GTACGCGACC AGCCCGAAGG AGTTCACCCG GTTCATCGAC TGGCTGGCGC GGCAGCAGAA GGCGAAGAAG GTCGTGGTGA AGCCGCTGGG CGAGGTCGTC GGCGGCCGGG TCTGGCCCGT GCCCGGCGAC TCCTGA
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Protein sequence | MWSWIKKAST VSLAAALAAG IPAAASAEPA AARQTVVALT FDDGTADHAR VAKMLRERGL RGTFYVNSGR LGRRGYLTAA DLRSMAKAGH EIGGHTREHV RLAHLSPDQQ RRQICEDRRA LFRLGLKVRS FAYPFGNFDQ TSRELAMYCG YTSARGINGL YRPDTCRSCP YAETIPPADL ALVRTTSQTR MPRTARNLAA SVTRAQAHGG GLVTFVFHRI RDDKRDQYAT SPKEFTRFID WLARQQKAKK VVVKPLGEVV GGRVWPVPGD S
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