Gene Tbis_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0880 
Symbol 
ID9167366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1003960 
End bp1004775 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content73% 
IMG OID 
Productpolysaccharide deacetylase 
Protein accessionYP_003651497 
Protein GI296268865 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTCGT GGATCAAGAA GGCGTCGACG GTCTCCCTCG CCGCGGCGCT CGCCGCCGGC 
ATTCCGGCGG CCGCCTCCGC CGAGCCGGCG GCCGCGAGGC AGACGGTGGT CGCCCTCACC
TTCGACGACG GCACCGCCGA TCACGCCCGA GTCGCCAAGA TGCTCCGCGA ACGCGGGCTG
CGGGGGACGT TCTACGTCAA CAGCGGCCGG CTCGGCCGGC GCGGCTACCT CACCGCGGCC
GACCTGCGGT CCATGGCGAA GGCCGGGCAC GAGATCGGCG GCCACACCAG GGAGCACGTC
CGCCTCGCCC ACCTCAGCCC CGACCAGCAG CGGCGCCAGA TCTGCGAGGA CCGGCGGGCG
CTGTTCCGCC TCGGCCTCAA GGTGCGGTCG TTCGCCTACC CGTTCGGCAA CTTCGACCAG
ACGAGCCGCG AGCTCGCCAT GTACTGCGGG TACACCTCGG CGCGCGGCAT CAACGGCCTC
TACCGGCCGG ACACCTGCCG GTCCTGCCCG TACGCCGAGA CGATCCCGCC CGCCGACCTC
GCGCTGGTGC GGACCACCTC GCAGACCCGG ATGCCGCGCA CCGCCCGCAA CCTCGCCGCC
TCCGTCACCC GGGCCCAGGC GCACGGCGGC GGGCTCGTCA CCTTCGTCTT CCACCGCATC
CGGGACGACA AGCGGGACCA GTACGCGACC AGCCCGAAGG AGTTCACCCG GTTCATCGAC
TGGCTGGCGC GGCAGCAGAA GGCGAAGAAG GTCGTGGTGA AGCCGCTGGG CGAGGTCGTC
GGCGGCCGGG TCTGGCCCGT GCCCGGCGAC TCCTGA
 
Protein sequence
MWSWIKKAST VSLAAALAAG IPAAASAEPA AARQTVVALT FDDGTADHAR VAKMLRERGL 
RGTFYVNSGR LGRRGYLTAA DLRSMAKAGH EIGGHTREHV RLAHLSPDQQ RRQICEDRRA
LFRLGLKVRS FAYPFGNFDQ TSRELAMYCG YTSARGINGL YRPDTCRSCP YAETIPPADL
ALVRTTSQTR MPRTARNLAA SVTRAQAHGG GLVTFVFHRI RDDKRDQYAT SPKEFTRFID
WLARQQKAKK VVVKPLGEVV GGRVWPVPGD S