Gene Tbis_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0545 
Symbol 
ID9167029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp604806 
End bp606020 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content65% 
IMG OID 
ProductCoproporphyrinogen dehydrogenase 
Protein accessionYP_003651165 
Protein GI296268533 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.693751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.412237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGGC CGCTGCTGCT TTACGTCAAC ATCCCGTTCT GCAATTCCAA ATGCCACTTT 
TGCGACTGGG TCGTCCAGAT CCCCGTGAGG GACCTGCGGC TCGACCAGCA GGCACCCGGC
CGGATCGCGT ATCTCGACGC GGTGCGCGCT CAGATCCGGG GTCAGGCGCC GGTGTTACGG
GAACACTATC AGCCGGCGAT CATCTATTGG GGAGGCGGCA CGGCCAGCAT CCTCGGCGAG
TCAGAGATCG AGTCTCTGTA CACGTGCCTG CGGAGCGAGT TCGATCTCAG TCACGTCCGG
GAGACCACGA TCGAGGGCAG CCCCGAGTCG CTCACCCCGC AGAAGCTCCG CCGATTGCGC
GAGCTCGGAT TCGATCGGAT CAGCATCGGG GTCCAGTCGT TCGACGATCA GCGGCTGCGA
CGGCTCGGCC GGGCGCACAG CGCCGAGCAG GCCGTTGAGG TCGTGAAGAA CGCCCACGCG
GCAGGGTTCC GCAACATCAA CATCGACCTC ATCGTCGGCT TTCCCGGTCA GACGGACGCC
GAGGTCGCCG AGTCAGTGCG CACGGCGCTG ACCCTGCCCA TCAATCACTT CTCGATCTAT
CCCTATCGCG CCAGCCCGGG GACCATCCTC CGCAAGCAGG TGGAACGGGG AGGGCACCTC
GACCTCAACC GGCAACTGGC GGCCTACTAC ATCACCCGTG ATCTGCTCGA GGAGGCCGGG
TTCCCCGAGT ACGCCATGTC GTACTTCGGC GCACCCCGGT GCGAAGCGGA CCAGGCCTAC
TACCGGCTGA CCATGGACTG GATCGGATTC GGGTCCGGGG CCAACTCATT GCTCGGCCAC
CGTTACCTCG CCTTCCGAAA AGGGAGGCTG CACGCGTATA ACCAGAATCC CCTCCGCTTC
GACGTCAACG CGCCCGCGTC GTCACCGCAG CTCACGCTGC ACTGGCTCTC CCAGGCGCTG
ACCACGGTGG AGGGCATGGA TGCGCGGGTC TACCAGGAGC GTACGGGCAC ACCCCTCCGG
GTCGCCTGTG AGGAACCTGA GGTGCAGGCC TACCTGAGGC GGATGAGCGA GCACGGCCGT
CTCATCATCG ACCGGAACGG CATCCGTATC CACCGCGAGG ACATCGCGCG AGTCATTATC
GCCCTGAACT GGATCGATAC TCCCGGGGGC GATCAAAAAG TCACCCGGCT CACACCGGTG
TCCGCTACCT CTTAG
 
Protein sequence
MTRPLLLYVN IPFCNSKCHF CDWVVQIPVR DLRLDQQAPG RIAYLDAVRA QIRGQAPVLR 
EHYQPAIIYW GGGTASILGE SEIESLYTCL RSEFDLSHVR ETTIEGSPES LTPQKLRRLR
ELGFDRISIG VQSFDDQRLR RLGRAHSAEQ AVEVVKNAHA AGFRNINIDL IVGFPGQTDA
EVAESVRTAL TLPINHFSIY PYRASPGTIL RKQVERGGHL DLNRQLAAYY ITRDLLEEAG
FPEYAMSYFG APRCEADQAY YRLTMDWIGF GSGANSLLGH RYLAFRKGRL HAYNQNPLRF
DVNAPASSPQ LTLHWLSQAL TTVEGMDARV YQERTGTPLR VACEEPEVQA YLRRMSEHGR
LIIDRNGIRI HREDIARVII ALNWIDTPGG DQKVTRLTPV SATS