Gene Tbis_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0388 
Symbol 
ID9166867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp435192 
End bp436520 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content71% 
IMG OID 
ProductPHB depolymerase family esterase 
Protein accessionYP_003651009 
Protein GI296268377 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.140919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAGCA CAGCCGGACG GTTGGTCGCC GTGGTCATCG CGGCGCTGCT CGCCGTCGCG 
GGAGCGATCC TGGCGCTGCC CGCCTCGGCG GCGTCCCTGG TCGAGGTGAC CGACTTCGGC
CCCAACCCGA CCAACCTGCG CATGCACCTC TACGTGCCGG ACCGGGTCCA GCAGCGGCCG
CCGGTCCTCG TGGCGGTGCA CTACTGCACC GGATCGGGCC CCGCCTTCTA CGCGGGCACC
GAGTTCGCCT CCCTGGCGGA CCGCTACGGC TTCATCGTGA TCTACCCGTC CGCCACGCGG
AGCGGGCAGT GCTTCGACGT CTCCTCCCCG GAGACGCTCC GCCACAACGG CGGCAGTGAC
TCCCTGGCGA TCGTGTCGAT GGTCCGCTAC GTCCTGCAGC GCTACAACGC GGACCCCGAC
CGGGTCTACG TGACCGGGGC CTCCTCCGGC GCGATGATGA CCAACGTCCT GCTCGGGGCC
TACCCCGACG TGTTCAAGGC CGGGGCGGCG TTCATGGGCG TGCCGTTCGG CTGCTTCGCC
ACCACGGACG GCTCGAGCTG GAACAGCGCC TGCGCCAACG GCCAGCTCAT CAGGACGCCC
CAGCAGTGGG GTGACCTGGT CCGCGCCGCC TACCCCGGGT ACCAGGGCCC GTGGCCGCGC
ATCCAGATCT GGCACGGCAC CGAGGACAAC ATCCTCCGCT ACCCGAACTT CCAGGAGCAG
ATCAAGCAGT GGACCAACGT CCACGGGCTG AGCCAGACCC CCTCGTACAC CGACCGGCCG
CAGTGGAACT GGACGCGCAC CCGGTACGGC GGCACCGGCG TCCAGGTCCC GGTGGAGGCG
ATCAGCATCC AGGGCGCCGG GCACGACCTG CCGCAGGCCG GCATGGCCCA GATGGCCATC
GCGTTCTTCG GCCTCGACCA GACCGGCCCC GGCCCGTCCC CCTCGCCGTC CACGCCGGCA
TCGCCGTCGC CCTCGCCGTC CACGCCCGCG TCGCCGAGCC CGCAGCCGTC CGGCACCTGC
CGGGTTCAGT ACGACATGAA CGCCTGGAAC ACGGGCTTCA CCACGTCCGT GACCATCACC
AACACCGGGA GCTCCCCGAT CAACGGCTGG GAGCTGACGT TCACGCTGCC GAGCGGCCAG
TCCGTCGTCT CGGCGTGGAA CGCGACCATC TCGCCGTCGA GCGGCCAGGT GACCGCGCGG
AACGTCAGCT ATAACGCGCT GATCCCGCCC GGCGGCTCCA CCAGCTTCGG CTTCCAGGGC
GTCCACACCG GCAACACCGG GAAGCCGGCC TCGTTCAGCC TCAACGGCGT GTCCTGCGCG
GTGAGCTGA
 
Protein sequence
MRSTAGRLVA VVIAALLAVA GAILALPASA ASLVEVTDFG PNPTNLRMHL YVPDRVQQRP 
PVLVAVHYCT GSGPAFYAGT EFASLADRYG FIVIYPSATR SGQCFDVSSP ETLRHNGGSD
SLAIVSMVRY VLQRYNADPD RVYVTGASSG AMMTNVLLGA YPDVFKAGAA FMGVPFGCFA
TTDGSSWNSA CANGQLIRTP QQWGDLVRAA YPGYQGPWPR IQIWHGTEDN ILRYPNFQEQ
IKQWTNVHGL SQTPSYTDRP QWNWTRTRYG GTGVQVPVEA ISIQGAGHDL PQAGMAQMAI
AFFGLDQTGP GPSPSPSTPA SPSPSPSTPA SPSPQPSGTC RVQYDMNAWN TGFTTSVTIT
NTGSSPINGW ELTFTLPSGQ SVVSAWNATI SPSSGQVTAR NVSYNALIPP GGSTSFGFQG
VHTGNTGKPA SFSLNGVSCA VS