Gene Tbis_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_0188 
Symbol 
ID9166663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp226002 
End bp228233 
Gene Length2232 bp 
Protein Length743 aa 
Translation table11 
GC content71% 
IMG OID 
ProductRND superfamily-like drug exporter 
Protein accessionYP_003650813 
Protein GI296268181 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCAAA GGAACTTCGC GGCCGCGATC GGGGGGTGGA GCGCCCGGCA CCGCTGGTGG 
GCGCTGCTGA TCTGGGTCGT GTTCGTGGCC GTGGCGACAG TGGCGGGCAA CGCCGTCGGC
ACCGCGGAGA TGGAGCGGTG GGAGGCGTTG AACGGCGACT CCCGCGAAGC CCTCCGGATC
CTCGACGAGG CGGGCTTCCC GAGGGTCGCC GGCGAGTTCG TCCTGGTGCA GGCCCGGCAG
GGGTCGCTCA CGGCCGACGA CCCCCGGTTC CGCCAGGCGG TGCTCGACGT CAAGAGCGCG
GTCGAGGCGA CCGGCGAGGT CCAGAACGTG CGCACGCCGT ACGACCCGGA GCCGTCCCCG
GTCACCCAGG ACCGGCGCAC CGCGCTGATC CGGTTCGAGA TGAAGGGTGA CGCCGCCACG
GCGAAGGACC GGGTCCGGCC GGTGCTCGAC GCGGTGGCCG GCGTGCAGCG GGCCCATCCG
GAGCTGCGGA TCGAGCAGGC CGGGGATGCG AGCAGCGACC TGCTGATCAA CGAGGCGATC
GACCGGGACT TCATGCGCGC CGAGCAGCTC TCGATCCCCA TCACCGTCGG CATCCTGCTC
GCCGCGTTCG GCGCGCTGCT CGCCGCGCTG GTCCCGGTCG CCCTGGCGAT GACGGCGATC
TTCGCGGCCA CGGGCCTGCT CGCCTTCACC AGCCAGCTCC TGCACGTCCA CTCGCTGACC
GCCAACCTCA TGCTCTGCAT CGGGCTGGCG GTGGGCGTCG ACTACTCGCT CTTCTACATC
ATGCGGCAGC GCGAGGAGCG GGCGAAGGGC CGCGACCCGC GGCGGGCCAT CGAGATCGCG
GCGGCCACCT CAGGCCGCGC GGTGCTGATC TCCGGCATCA CGGTCATGGT GGCCATGGCC
GGGATGTTCC TCACCGGCAG CGGGATCTTC ATGGGCTTCG CCGAGGGCAC CATCCTCGTG
GTGTTCACCG CCGTCCTCGG CTCGCTCACC GTCCTCCCCG CACTGCTCTC GCTGATCGGG
GACAAGATCG ACTCCCGGCT CATCCACGGC ACGGTCCGGG CGGCCACCGG CGGCCGGATC
ACCTGGCGCC GGGTGCTCGG GGTGCGCGGC GGCGAGAGCC GCCTGTGGAG CGCGATCCTC
AAGCCGGTGC TCCGCCGCCC CGGCCTCTCG GTGGTCGTCG CCGGCGGCCT GCTCGCCGCG
CTCGCGGTCC CGGCCCTCGG CCTCAAGACC GGCCCCGAGA GCATCGACGA CCTTCAGGGC
GACTACTCGA TCGCCGAGAC CTTCAAGCGG ATCAACAGCG CCTTCCCCAG CGGCACCGAC
CCGGCCGTGG TCGTGGTCAA GGCCGCCGAC GTGACCGCAC CCGAGTTCAC CGCCCGGATC
GAGGAGTTCA AGCGGCGCGC GCTCGCCACC GGCCAGACCA ACGAGCCGAT CAACGTCGTG
GTCAACCCCG ACAAGACCGT CGCGATGATC ACGATCGGCA TCAAGGGCAC CGGCACCGAC
GCCGTCTCCG AGCAGGCGAT CCGCACGCTC CGCGAGCAGG TCATCCCCGA GACCCTCCCC
GGCGCGCACG TCACCGGGAT GACGGCCAAC GGGATGGACT TCGGCGAGCA GCTCCGCCGC
AGCCTGCCGC TGGTGTTCGG GTTCGTGCTG CTCTTCGCGT TCCTCCTGCT GCTGGTCTCG
TTCCGCTCGG TGGTGATCGC GATCACGTCG ATCGCGCTCA ACCTGCTCTC CGTCGGCGCG
GCCTACGGCG TGCTCGTGCT GGTCTTCCAG AAGGGGTACG GCGAGAGCCT GCTGGGCTTC
CGCTCCACCG GGGAGATCAC CGACTGGGTG CCGCTCTTCC TGTTCGTGAT CCTCTTCGGC
CTCTCCATGG ACTACCACGT GTTCATCCTC AGCCGGATCC GGGAGGCGTA CGACAGTGGC
ATGCGCACCG AGGACGCGGT GGTCACCGGG ATCACGAGCA CGGCCGCCGT GGTCACGAGC
GCGGCGATCA TCATGGTGGC GGTGTTCGCG ACCTTCGCCA CGCTCTCCCT GCTCCAGTTC
AAGGAGCTCG GCTTCGGGCT CGCCGTGGCG GTCCTGATCG ACGCGACGAT CGTCCGCGCC
GTGCTGCTCC CCGCGGCCAT GCGGCTGCTC GGCGACCGGA ACTGGTACCT GCCGCGCTGG
CTCGGCTGGC TGCCCACGCT CTCGCACGGG GACGAGCAGG AGAAGGAGCG GACGCCCGCC
CTCGTCGGCT GA
 
Protein sequence
MRQRNFAAAI GGWSARHRWW ALLIWVVFVA VATVAGNAVG TAEMERWEAL NGDSREALRI 
LDEAGFPRVA GEFVLVQARQ GSLTADDPRF RQAVLDVKSA VEATGEVQNV RTPYDPEPSP
VTQDRRTALI RFEMKGDAAT AKDRVRPVLD AVAGVQRAHP ELRIEQAGDA SSDLLINEAI
DRDFMRAEQL SIPITVGILL AAFGALLAAL VPVALAMTAI FAATGLLAFT SQLLHVHSLT
ANLMLCIGLA VGVDYSLFYI MRQREERAKG RDPRRAIEIA AATSGRAVLI SGITVMVAMA
GMFLTGSGIF MGFAEGTILV VFTAVLGSLT VLPALLSLIG DKIDSRLIHG TVRAATGGRI
TWRRVLGVRG GESRLWSAIL KPVLRRPGLS VVVAGGLLAA LAVPALGLKT GPESIDDLQG
DYSIAETFKR INSAFPSGTD PAVVVVKAAD VTAPEFTARI EEFKRRALAT GQTNEPINVV
VNPDKTVAMI TIGIKGTGTD AVSEQAIRTL REQVIPETLP GAHVTGMTAN GMDFGEQLRR
SLPLVFGFVL LFAFLLLLVS FRSVVIAITS IALNLLSVGA AYGVLVLVFQ KGYGESLLGF
RSTGEITDWV PLFLFVILFG LSMDYHVFIL SRIREAYDSG MRTEDAVVTG ITSTAAVVTS
AAIIMVAVFA TFATLSLLQF KELGFGLAVA VLIDATIVRA VLLPAAMRLL GDRNWYLPRW
LGWLPTLSHG DEQEKERTPA LVG