| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_4293 |
|---|
| Symbol | |
|---|
| ID | 9158480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014159 |
|---|
| Strand | - |
|---|
| Start bp | 49646 |
|---|
| End bp | 51019 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003649198 |
|---|
| Protein GI | 296141956 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCAGC CGAGTCCGTA CACGCCTGGC GCGATCGCGC GTCAGGTGCC TGGTCGGGAC
CAGGAGTTGG CGGACTATCA GGAGCGGTTG TCGTTCATGG CTGCGACGCA GTCGCTGGTG
CCGCGGATTC GGATCGACCG TGGGCCGCGG GGGCTGGGTA AGACGTCGAT GTTGCGGGCT
GCGGAGACGA TGGCTGAGCA GCAGTTCAAC GCGCTGTCGG TGTGGGTCGT GGCGGGGGAG
GGGTCGTTGC TGTCGGCGAT CGCGCGGTCG GCTGAGCGGG CGGTAGCGGA CGTGACTGGC
GACCGTGGCG GTGAGCGGGG CCGGCTCAGT GAGCGGTTGA CGGTGAAGTT CGGACTGTCG
GTACCGGGAG TGGGGTCGGC GGAGGCGACG GTGGCGCCTC GTGCGCGTGA GCGGGAGGGG
GAGGGGCCGG TCGACACCTG GGACCTGCAG GACCTGCTCA CTGAGGTCCG GGACAAGGTG
CGCAAGCAGC GACCCGGCGG TGTGGTGGTG TTCGTCGACG AGATCCAGCA GGGCGATCCG
GCGAGCCTGC GGACGTTGAG CTACACGTGG CAGAACCTCC AGGCTCGGCG CCCGGATCTT
CCGGTGGCGC TGTTCGGGGC CGGCCTACCG ACGAGTACTG CGGTGATCAA CAAGGCGGTG
ATGAACGCGG AGCGCTTCGA CTACCGCACC CTCGGTGGAC TCAGTGACGA TGCCGCGGCG
ATCGCCTTGG CAGCGCCGGC GCAGCAGCGT GGCGTGCAGT GGACGCCGGA AGCGCTGCGC
AGAGCAGTAG CTATCGCCGA TGGCTACCCG TACACGGTGC AGCTGATCGG TGAACACACG
TGGGCGGCCG CAGGCCGACC CGATCCAGGC GCACTCATCA CAGTCGAGCA TGTGGAGCAT
GGACAGGCGT TGGTGGATAG GTCGATGCAG CAGATCTATG AAGCGCGGCT AGACCGTGCA
TCGACGCCCG CGCAGCAGGA GTTCGTGATG ACGATGGCGC AGCTGGGCAA CGGGCCGGTC
CCGCGAGCGG CGATCGCCCA GCAGCTGGGA GTGTCGAGCA CAGGCCTATC AACAACCCGC
GACGAGCTAC TCGAGGCAGG CGTCATCACC GAGGCCGGAC GGGGCATGCT GACCTTCGGA
TTGCCCGGGT TCGCCGAATA CATCCGCGAC GAACACGGCC TCGAGCTACT CCCTGCACCC
GCCCGGAGCA TCCGCGGCCG CAGCGCTCTC AACGCCAGCC TTGGACGGAC AGCGACCGGG
AGGAGCGGCG AGAGTGGTGG CGTGAGTGGT GGTACGGCTA CACCACCCGC CGTCCAATCG
CACCGGCGCA GCCCTGAAAC ACCAGGTGCC TCGCACGACG GACCATCACT GTGA
|
|---|
| Protein sequence | MVQPSPYTPG AIARQVPGRD QELADYQERL SFMAATQSLV PRIRIDRGPR GLGKTSMLRA
AETMAEQQFN ALSVWVVAGE GSLLSAIARS AERAVADVTG DRGGERGRLS ERLTVKFGLS
VPGVGSAEAT VAPRAREREG EGPVDTWDLQ DLLTEVRDKV RKQRPGGVVV FVDEIQQGDP
ASLRTLSYTW QNLQARRPDL PVALFGAGLP TSTAVINKAV MNAERFDYRT LGGLSDDAAA
IALAAPAQQR GVQWTPEALR RAVAIADGYP YTVQLIGEHT WAAAGRPDPG ALITVEHVEH
GQALVDRSMQ QIYEARLDRA STPAQQEFVM TMAQLGNGPV PRAAIAQQLG VSSTGLSTTR
DELLEAGVIT EAGRGMLTFG LPGFAEYIRD EHGLELLPAP ARSIRGRSAL NASLGRTATG
RSGESGGVSG GTATPPAVQS HRRSPETPGA SHDGPSL
|
|---|
| |