| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_4190 |
|---|
| Symbol | |
|---|
| ID | 9158378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 4315024 |
|---|
| End bp | 4316469 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003649098 |
|---|
| Protein GI | 296141855 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGTC CCCCGATCCG CTTCGACCGG GTCGCGTGGA CCGTCCTCGG CCTCACCGCG
CTCGCCCTGG TCATCGGATA CCAGATCAAG GCCCAGTGCA CCGGTGCCCC GTTCGACGAC
CTCGGGCGAT CGATGGGCTT CGCCGACACT CCCACCAGGA TCTGCTACTC GGATCTGCAG
TACCTGTGGT CGGGGCGCGA TGTGAACAAC CACGTCTTCC CGTACCTGAA CGGCTGGATC
GACGGCGACG GCAAGCTCCA GGGCGGAGCG ATCGAATACC CCGTCCTCAG CGGCCTGCTG
TTCTGGCTCG GCGCGATCGG CGCCACCAAC GACGCCGAGT TCCTGCTGCA CATGGCGGTC
CTGCTCGCCC CGTTCGGACT GCTCACCGGA TGGATTCTGG CGAAGGTCTC GGGGCGCACC
GCGGCGATCT GGGCGATCAC CCCGCCACTG GCCCTGTACG CCTTCCACAA CATGGAACTG
CCGGTGGTCG CCGCCGCGAC GGCCGCCTTC GGCGTGATGG CATGGGCGGA CCGCGCCGGC
GGCTCCGTGC GCCTGCCCGC CATGACGGCA GCGGCGATCT TCGCTGTGGG CTTCGACCTG
AAGATCTACC CGGGGCTGTT CGTCGCGCCC CTGGTTCTGT ACGTACTCAC CCACGGTCGC
GGCGGGACCG TCGCACTGCC CGACGGTCCC GGGCGCGGGA CCCGCGTGAA CTGGCGCCTG
CTCGACTGGG CGGGCGCCGC CGCCACAGCC GCCACCGCGG TCGTCGTCGC CGTTGCGATC
AACGTGCCGT TCATCGTGTT CGGGGACGAG GGCTGGCGGG CGTCGCTGAA GTTCCAGGAG
CTGCGCACGG CGGACCTGTC CACGAACTCG GTCTGGTACT GGGGGGTGCG CGAGATCTTC
GGCGACCCCG GCGACTACGA CGCCTTCGTC TCCGGCGCCT CGCCGCTGCT GATCCTGGGC
GCGATCGTGG CGCTCCTGCT CGTGGGCTGG TCGCACTACC GGCGCACCGG CGTGTACCCG
TGGCTCGGGA TCAGCGGCGC GATCCTGGCC GCGTTCATGC TGTTCCACAA GGTGCACTCA
CCGCAGTACG TGCTGTGGCT GCTGCCCTTC TTCGTGCTGC TCACGGTGGA CTGGCGCGCG
ATCGCCGCCT ACCTGGTGTT CGATCTGAGC CTCGAACTCA CCGTATGGAC GTACTTCTCC
GAGCACGCAG CGAACCAACC GATCACCTGG TGGGTTCAGT GGGGCGTCTG GATCGGCGTC
TGGGGCCGCG CGGCGATGCT GCTGTTCTTC CTCTGGTACC TGCCCGGCCG TCCGCTGCGA
CTGCGCAGCG ATTCCGACAG CGGAACATCG GGCGCACCGT CGAGCGGTCC GCCTGCGGGA
TCGTCGAGCG GCGGTGAGAA CGGGCCGGGG AACGTGGACC GCACCAGATC TTCGTCGGGT
TTGTAG
|
|---|
| Protein sequence | MPRPPIRFDR VAWTVLGLTA LALVIGYQIK AQCTGAPFDD LGRSMGFADT PTRICYSDLQ
YLWSGRDVNN HVFPYLNGWI DGDGKLQGGA IEYPVLSGLL FWLGAIGATN DAEFLLHMAV
LLAPFGLLTG WILAKVSGRT AAIWAITPPL ALYAFHNMEL PVVAAATAAF GVMAWADRAG
GSVRLPAMTA AAIFAVGFDL KIYPGLFVAP LVLYVLTHGR GGTVALPDGP GRGTRVNWRL
LDWAGAAATA ATAVVVAVAI NVPFIVFGDE GWRASLKFQE LRTADLSTNS VWYWGVREIF
GDPGDYDAFV SGASPLLILG AIVALLLVGW SHYRRTGVYP WLGISGAILA AFMLFHKVHS
PQYVLWLLPF FVLLTVDWRA IAAYLVFDLS LELTVWTYFS EHAANQPITW WVQWGVWIGV
WGRAAMLLFF LWYLPGRPLR LRSDSDSGTS GAPSSGPPAG SSSGGENGPG NVDRTRSSSG
L
|
|---|
| |