Gene Tpau_4143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_4143 
Symbol 
ID9158331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp4273955 
End bp4274635 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content68% 
IMG OID 
Productprotein of unknown function DUF124 
Protein accessionYP_003649051 
Protein GI296141808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGTAC AGCTCCGACA CAATCCCTCG TTCACGATGG CCCGCTGCCA CCTGGCACCG 
AACGAGCCGA TGACGGTGGA GTCGGGTGCG ATGGTGGCGC ACTCCGCCGG GATGAACCTC 
CAGTCCCAGG CACAGGGCGG AATCATGCAG GGCCTCAAGC GCAGCCTGCT CTCGGGAGAG 
TCCTTCTTCG TCTCCACCTT CACGGCACCG GCGTCGGGCG GCTGGGTCGA TGTCGCGGGC 
ACCCTGCCGG GTGACATCGC GCTGGTGCAG ATCCGGCCCG ACCGCCCCTT CTACATCACC 
CGCGGAGGGT GGCTCGCCAG CGCGCACGGC GTGCAGACCA GTGCCCAGTT CGGTGGCGCG 
AAGACGTTCT TCGGCGGTGA GGGTGCCTTC GGCCTGCAGG CGTCGGGCCA GGGTGAGGTG 
CTGGTGGCCT GCTACGGCGC GATCGACGTG ATCGACCTGC AGCCCGGCGA ACAGGTGGTC 
ATCGACACCG GCCATGTCGT CGCCTACGAC CTGAGCATCA GGTTCAGCAT GCGCCGGGCG 
GTTCAGGGGA AATGGATGCA GTCGGCGAAG TCGGGCGAGG GGATGGTCTT CGAATTCACC 
GGACCGGGCC GAGTGCTGCT GCAAACCCGC AACCCCCGTG GACTCGAAGG ATGGGTCCGC 
TCGGTGGTCC CCTCCGCCTG A
 
Protein sequence
MQVQLRHNPS FTMARCHLAP NEPMTVESGA MVAHSAGMNL QSQAQGGIMQ GLKRSLLSGE 
SFFVSTFTAP ASGGWVDVAG TLPGDIALVQ IRPDRPFYIT RGGWLASAHG VQTSAQFGGA 
KTFFGGEGAF GLQASGQGEV LVACYGAIDV IDLQPGEQVV IDTGHVVAYD LSIRFSMRRA 
VQGKWMQSAK SGEGMVFEFT GPGRVLLQTR NPRGLEGWVR SVVPSA