Gene Tpau_4047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_4047 
Symbol 
ID9158231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp4179770 
End bp4180408 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content68% 
IMG OID 
ProductProtein of unknown function DUF2306, membrane 
Protein accessionYP_003648957 
Protein GI296141714 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAC TGCTGGTCGG ATCGCTCATC GTCGCGGCAT TCCTCGCCTA CGCGCTCCCC 
GTGTACCTCA CCGGTGGCAG CCGGGTACCG CTCGACGGTC AACCCTCCTG GTACTACCCA 
CTCCTGGTGG GGCACATCAT GCTCGGCGCC GTCGCGATGC TCGCCGGGCT GGTGCAACTC 
GGCCGACGCT GGTTCGCCCG CTATCACCGG ATCGCCGGGC GGGTCTACGT GGCGTGCGCG 
ATTCCGGTCG GGCTGGCGTC GATCACCGTG GGCGCGATGA CGCCGTTCGG GCCGGCGAAC 
GCCGTCTCCA ACGTGACGCT GGGCTCGTTG ATGCTGGTGT TCACCGTGCT CGGTGTGCGC 
TCGATCCTGG CCCGCGACGT GACGCAGCAC CGGCGCTGGA TGCTTCGCAG CGCGGCGCTG 
ATGTACTCGG TGATCATCAA CCGCATCCTG GGACCGGTGA TGTTCCTGCT GCTCGACGGC 
CTGGGCCTGG AATCGCGCGT GGTGGACGGT CTGGGCGTGG CGCTCACCGC CTGGATGAGC 
TGGCTGCTCG CCCTGGGTGT CTGCGAGTGG TGGCTGCGCC GCACACCCCG TCGCGAAACC 
GGCACTCGGA TCGGTCGGAC GAAGACCATC GCCGCGTAA
 
Protein sequence
MKKLLVGSLI VAAFLAYALP VYLTGGSRVP LDGQPSWYYP LLVGHIMLGA VAMLAGLVQL 
GRRWFARYHR IAGRVYVACA IPVGLASITV GAMTPFGPAN AVSNVTLGSL MLVFTVLGVR 
SILARDVTQH RRWMLRSAAL MYSVIINRIL GPVMFLLLDG LGLESRVVDG LGVALTAWMS 
WLLALGVCEW WLRRTPRRET GTRIGRTKTI AA