Gene Tpau_4038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_4038 
Symbol 
ID9158222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp4168294 
End bp4169388 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content69% 
IMG OID 
ProductDNA primase small subunit 
Protein accessionYP_003648948 
Protein GI296141705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGG CCCCGGCAGC CGAGGTGATC GTCCCGGGCG GTGATGGAGC CGACCGGGCG 
GTTCGGGTTT CGAGCCCCGA CCGGATCATC TACCCCGCCA CCGATCTCAC CTCCGCGGTC
TCCAAACTCC AGGTGGCGCA GTACTTCGCT GCCGTCGGTG GGCCGCTTCT CGCCGCGATC
GGCGACCGCC CCACGGCGCT CGAACGGTGG CCCGGCGGTG TGCACCCCGG CGGCCGGCTG
GCTCAGGGCC CGCAGGACAA GGACGCCGAC GGCTTCTATC AGAAGCGGAT GATGAAGGGC
GCCCCGCCGT ACGCGCAGAC GGTGCGCATC GCCTTCCCGT CCGGTCGTCC GGCGGACGAG
CTGTGCCCGT CGGAGATCGC CATCCCGGTC TGGTGTGCCC AGATGGGCAC CATCACCTTC
CATCCCTGGC CCGTGCGCAG CGCCGATGTG GACCGTCCCG ACGAGCTCCG GATCGACCTG
GATCCCCAGC CCGGCACCGA TTTCGGTGAT GTCGTGCGTG TGGCGGCCAT CGCGAGGCAG
CTGTTCGCCG ACCTCGGAAT GCGCGCCTTC TGCAAGACCT CCGGCAATCG CGGCGTGCAC
GTCTTCGTCC GCATCGAACC CCGCTGGGAG TTCACCGACG TCCGGCACGC GGCCATCGCC
TTCGGGCGCG AGTTGGAGAA GCGCGACGAC GGCGTGACCA CCGCCTGGTG GAAGGAGGAA
CGGGGCGAGC GGATCTTCGT GGACTACAAC CAGAACTGCC GCGACCGCAC CATCGCCTCG
GCCTGGTCGT TGCGCGCCGT GCAGGGAGCC ACCGTCTCCA CCCCGCTCAC CTGGGAAGAG
CTGGCCGAGG TCACCGATCC GCGGATGTTC AACCTGTTCA CCGTGCCCGA ACGGCTGGCC
GACGGGAATC CGTGGGCGGA GATGGACGAG GTGGCGCACG ACCTCACGCC GCTGCTGCAG
AAGTGGGAGG AACACCCCGT GGAGCTGAAC TTCCCACCTG ATTACCCGAA GATGCCGGGG
GAGCCGCCGC GGGTACAGCC CAGCAAGAAG GTGGCCGAGC ACTGGGATGC CGACGGCAAC
CGCATCGACC AGTAG
 
Protein sequence
MAKAPAAEVI VPGGDGADRA VRVSSPDRII YPATDLTSAV SKLQVAQYFA AVGGPLLAAI 
GDRPTALERW PGGVHPGGRL AQGPQDKDAD GFYQKRMMKG APPYAQTVRI AFPSGRPADE
LCPSEIAIPV WCAQMGTITF HPWPVRSADV DRPDELRIDL DPQPGTDFGD VVRVAAIARQ
LFADLGMRAF CKTSGNRGVH VFVRIEPRWE FTDVRHAAIA FGRELEKRDD GVTTAWWKEE
RGERIFVDYN QNCRDRTIAS AWSLRAVQGA TVSTPLTWEE LAEVTDPRMF NLFTVPERLA
DGNPWAEMDE VAHDLTPLLQ KWEEHPVELN FPPDYPKMPG EPPRVQPSKK VAEHWDADGN
RIDQ