Gene Tpau_3981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3981 
Symbol 
ID9158163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp4099287 
End bp4100312 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content70% 
IMG OID 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_003648891 
Protein GI296141648 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGTAC GCGTAGGAGT CGTCGGCGCG ACCGGCCAGG TGGGCGCCGT CATGCGCCAG 
TTGCTGCTGG ACCGGAACTT CCCGGCCGAC GAGGTGCGGT TCTTCGCGTC CTCGCGGTCC
GCGGGCAAGA AGCTGCCCTT CGGGGATCGC GAGATCGTGG TCGAGGACGC CGAGACCGCC
GATCCGACTG GGCTCGATAT CGCGCTGTTC AGCGCGGGCG CGACGATGTC ACGCGTGCAG
GCGCCGCGGT TCGCCGCCGC CGGCGTCACC GTGATCGACA ACTCGAGCGC CTTCCGCAAG
GATCCCGATG TGCCGCTGGT GGTCTCGGAG GTGAACCCGG AGCAGGTCCA CGATCTGAAG
AAGGGCATCA TCGCCAACCC GAACTGCACC ACCATGGCCG CGATGCCCGT GCTCAAGGTG
CTGCACGACG AGGCCGGCCT GCAGCGGCTC ATCGTCTCCT CGTACCAGGC CGTGTCGGGG
TCGGGGCTGG CCGGCGTCGA GGAGCTCGTG TCCCAGGTGC GCGCGGTGGA GCCCGAGGCC
GAGAAGCTGG TGCACGACGG CTCGGCCGTG GAGTTCCCGG CACCGAACAA GTACGTGGCG
CCGATCGCCT TCAACGTGCT GCCGCTGGCC GGCTCGATCG TCGACGACGG CTCCGGCGAG
ACCGACGAGG ATCAGAAGCT GCGCAACGAA TCGCGCAAGA TCCTCGGCCT GCCGGAGCTG
CTGGTGTCCG GCACGTGTGT GCGGGTGCCC GTGCTCACCG GCCATTCGCT GTCGATCAAT
GCCGAGTTCG CGGCGCCGCT GTCGGTGGCG CGGGCGCAGG AGCTGCTCGC CGCGGCGCCC
GGCGTGAAGC TGGTCGATGT GCCCACGCCG CTCGCCGCCG CCGGCGCCGA CGACTCGCTG
GTCGGCCGCA TCCGGCAGGA TCCGGGCGTG CCCGAGGGCC GCGGTCTCGC GCTGTTCATC
AGCGGCGACA ACCTGCGTAA GGGCGCGGCG CTCAACACCG TGCAGATCGC GGAACTGCTG
GTCTAG
 
Protein sequence
MGVRVGVVGA TGQVGAVMRQ LLLDRNFPAD EVRFFASSRS AGKKLPFGDR EIVVEDAETA 
DPTGLDIALF SAGATMSRVQ APRFAAAGVT VIDNSSAFRK DPDVPLVVSE VNPEQVHDLK
KGIIANPNCT TMAAMPVLKV LHDEAGLQRL IVSSYQAVSG SGLAGVEELV SQVRAVEPEA
EKLVHDGSAV EFPAPNKYVA PIAFNVLPLA GSIVDDGSGE TDEDQKLRNE SRKILGLPEL
LVSGTCVRVP VLTGHSLSIN AEFAAPLSVA RAQELLAAAP GVKLVDVPTP LAAAGADDSL
VGRIRQDPGV PEGRGLALFI SGDNLRKGAA LNTVQIAELL V