| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3973 |
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| Symbol | |
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| ID | 9158155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 4091357 |
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| End bp | 4093099 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | penicillin-binding protein transpeptidase |
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| Protein accession | YP_003648883 |
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| Protein GI | 296141640 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.129617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCTGC GCCGTTCGCT CGCCGTCGCC GTCGCCGTTG TCCTGGCGTC CACGGCGGCC
GCGTGCTCGT CCGAGGATCC CGCCGCGGAG TTCGCCGCCG CCGTCACTGC GCGCGATGCC
CAAGCCGCGG CGGACCTGAC CTCCGATCCG GCGGCCGCGA AGCCCGCGTT GCAGGCCGCC
TTCGACGGAA TGGGCAGCGC GAAACCCTCG GTGACGGCCG GCCGCGACGG CGACTCCCCC
GCGCTCGGCT GGTCCTGGGC GCTACCGCGC GGCAAGAAGC TCGAGTACTC CTCGCCGGTG
CAGACGTCCG GCGGGCGCGT GACATGGTCG CCCACTCTGA TCCATCCGGA CCAACCGCCC
GGCGGACGAC TGTTGTATTC TGACGAGAAG TCATACCGCA CACCGGTACT CGACCGGAAG
AACAGTCCGC TGATGACCTG GCAGACGGTG ACCGTGGTCT CGCTGGCAGC CGATCGCAGC
GACTCCGCTG AGAACCTGGC GGCGCGGCTG AACCCGATCG ACCGGTCGGT GACGGCGGCC
AGCATCCGCG CCGCGGTGGC GAACAAGACC GGTGCCGTGG ACGTGATCAG CCTCCGAGCC
GACGACGCAC GACGCGCAGG TGACCTCCGT TCGATCAGCG GCGTCACCAC TCGGGAACAG
GGACGGCTGC TCACCGCCGC CCCCGCGCTC CGTTCGCCAC TGGGCAACGG CCTCGAGGAG
CGCTGGCGCG GGGCGGTCGA CGGTGCCGCC GGGGCAAGCG TGAATCTGGT CGACAGCAGC
GGAAAGACGC TGCGGCACAT CGAGTCCTTC CCCGGGACGA CCCCGGCCCC GGTACGCAGC
ACACTGGACG CCGGCCTGCA ACGGGCCGCC AACGCCGCAG TGGCCGGGGA GAATCGGCCC
ACGATGCTGG TGGCGATCCG GCCGTCTACG GGCGGGATTC TGGCGGTCGC GCAGAACGCC
GCCGCCGACA AGCAGGGGCC GATCGCACTG ACCGGGTTGT ACCCGCCCGG CTCGACCTTC
AAGACGATCA CCACCGCCGC GGCCCTGGAC GCCGGCGTCA CCACGCCGAA CGCGATGCTC
GATTGCCCCG GACGGGCCAC CTTCGGCACG CGCACGATCC CGAACGAAGA CGACTTCGCG
CTCGGCTCCG TACCGCTCCA CACCGCATTC GCCAAGTCCT GCAACACCAC GATGGCCGGC
CTCGGCACCA AGCTGGGCGA GAACGCGCTG GCCGATACGG CGAAGACCTT CGGCCTGGGC
GTGGATTTCG TGATCCTCGG AATCACCACG GTCACCGGCT CCGTGCCCTC CGCGCGCACC
GACGCCGAGC GGGTGGAGGA GTCGATCGGC CAGGGCCGGG TCACCGCATC GCCCTTCGGC
CTCGCGGTCG TCGAGGCGAG CCTCGCCGCG CGGAACACCG TACGTCCCTC CTTGTTCGAC
GGTGAGCCGG CCCGAGCCGA TACGCCCGGC CGGCGGATCG ATGCCGGCGT CGCCGATGCA
CTGCGTGCCG CGATGCGCGA GACCGTGACC GCAGGGACGG CGACGGCGCT GCGCGACATT
CCGGGACTCG GCGGCAAGAC CGGGACCGCC GAGTTCGGCG ACAACACGCA CGCGCACGGC
TGGTTCGCCG GGATCGTCGG AGACCTCGCA TTCGCCACGC TCGTGGTCTC GGGCGAGAGC
TCCGGTCCGG CGGTATCGGT GAGCGGCGCC TTCCTGCGCG GCGCGGGCGG CGATCTGCCC
TGA
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| Protein sequence | MHLRRSLAVA VAVVLASTAA ACSSEDPAAE FAAAVTARDA QAAADLTSDP AAAKPALQAA
FDGMGSAKPS VTAGRDGDSP ALGWSWALPR GKKLEYSSPV QTSGGRVTWS PTLIHPDQPP
GGRLLYSDEK SYRTPVLDRK NSPLMTWQTV TVVSLAADRS DSAENLAARL NPIDRSVTAA
SIRAAVANKT GAVDVISLRA DDARRAGDLR SISGVTTREQ GRLLTAAPAL RSPLGNGLEE
RWRGAVDGAA GASVNLVDSS GKTLRHIESF PGTTPAPVRS TLDAGLQRAA NAAVAGENRP
TMLVAIRPST GGILAVAQNA AADKQGPIAL TGLYPPGSTF KTITTAAALD AGVTTPNAML
DCPGRATFGT RTIPNEDDFA LGSVPLHTAF AKSCNTTMAG LGTKLGENAL ADTAKTFGLG
VDFVILGITT VTGSVPSART DAERVEESIG QGRVTASPFG LAVVEASLAA RNTVRPSLFD
GEPARADTPG RRIDAGVADA LRAAMRETVT AGTATALRDI PGLGGKTGTA EFGDNTHAHG
WFAGIVGDLA FATLVVSGES SGPAVSVSGA FLRGAGGDLP
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