| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3920 |
|---|
| Symbol | |
|---|
| ID | 9158101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 4037339 |
|---|
| End bp | 4037863 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003648831 |
|---|
| Protein GI | 296141588 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGCTCG ATGACGTACT GGCTCGGCAG GAGATTCACG ATGTCGTGCT GCGCTACTGC
CGCGGTATCG ACCGGCTCGA CCTCGACGCG GTACGCGAGT GCTACCACCC GGGCGCCGTC
GATCACCACA CCGGGTTCAC CGGTCCGGTC GAGGAGTACG TACCTTGGGT ACGCGGCCAA
CTCGCATCAC TCGGTGGCAC GCACCATCAG ATCGGCAATC ATCTGTGTGA GCAGTTGCGG
GATGTCGCCG CAGTCGAGAC ATATTGCACG GCAACGCATT GGTCCAGGCC GGGTGCGGAC
CTCCAGGTCC ATCTGACGCT GGGGATGCGC TATGTGGACC GGTTCGAGCG CCGCGGTGGA
CGGTGGGCGA TCGCGGAGCG CTGGGCCGTG ACCGACTGGA CGCGCTGGGA GAACGATCTG
ACGGGGCCCC TCGGCGTCCC CGAGGCGGGG CCGCCGCCTG GGCGCGAGGG CGACGATCCG
GTCGACCTGC TGCGCGCTCA CTTACTGGGG CGCGAGCGTT CGTAG
|
|---|
| Protein sequence | MTLDDVLARQ EIHDVVLRYC RGIDRLDLDA VRECYHPGAV DHHTGFTGPV EEYVPWVRGQ
LASLGGTHHQ IGNHLCEQLR DVAAVETYCT ATHWSRPGAD LQVHLTLGMR YVDRFERRGG
RWAIAERWAV TDWTRWENDL TGPLGVPEAG PPPGREGDDP VDLLRAHLLG RERS
|
|---|
| |