Gene Tpau_3871 details

Gene Information

• Locus tag: Tpau_3871
• ID: 9158052
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3993699
• End bp: 3994241
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 67%
• Product: bifunctional deaminase-reductase domain protein
• Protein accession: YP_003648785
• Protein GI: 296141542

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.957428
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCAGCA TCCACGCACA CGAATTCGTC ACGCTCGACG GCTATTTCGA TGACCCCAGT 
TTCACCGTCC CGTTCGGATT CGATCCGGCG ATGGGCGAGA CGTTGGGCGC GATCACCGGG 
GCGGCGAGCG ATATCCTGTT GGGCCGCAAC ACGTACGAGA TGTTCGCGCC GGCTTGGCGC 
GACCGCACGC CGGAGGACGA TCCGGGTGCC CCGTTCTTCA ACGAGACCAC CAAGCACGTG 
GTGGGGGCGA ACCCGCTCGT CGAGCAGTGG AACAACACGG TGCCTCTGGG CGCGTACGAC 
CCGGCGAAGA TCGCCGAGCT GAAGGCGTCG AGCGCGGGCG ACATCTACAT CAGCGGCAGC 
GGCCGGCTGG TGCGGGCCCT GCTCCGCGAG GGTCTCCTCG ATTCGCTGCA CCTGTTCGTC 
TACCCCGTGG TGCTCGGCAC GGGCGAGCGC CTGTTCGCCG ATGACCAGCT GACGCTGGCC 
CTCCAGGAGT CGCAGGCCTA CGACAACGGC GTACTGCACC TCGCGTACGG GCCCGCCGCG 
TAG 

 

Protein sequence

MGSIHAHEFV TLDGYFDDPS FTVPFGFDPA MGETLGAITG AASDILLGRN TYEMFAPAWR 
DRTPEDDPGA PFFNETTKHV VGANPLVEQW NNTVPLGAYD PAKIAELKAS SAGDIYISGS 
GRLVRALLRE GLLDSLHLFV YPVVLGTGER LFADDQLTLA LQESQAYDNG VLHLAYGPAA