| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3808 |
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| Symbol | |
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| ID | 9157988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 3929140 |
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| End bp | 3930783 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003648725 |
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| Protein GI | 296141482 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.605068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGCA AGCTGTACAA GACCGCCACA GTCCCGGTAT CGGACTCCGA GACGGTCGAC
TACATCGTGG TCGGCTCGGG TAGCGCCGGC TCGGTGGTGG CCGGACGGCT CGCCGACACC
GGCGCTACCG TCGCACTGCT GGAGGCCGGG CCTGCCGACA ACACCCGGAT GACACAGGTG
CCCGGCATGA TCACGATGGT GCACACCGTT CCGCAGATGA AGTCGCGGGT AGCGTGGAAG
CAGTACAGCG TGCCGCAGAA GTTCGCCAAT GACCGGGCGA TTCCGATGAC CCGCGGCAAG
ATCCTCGGCG GCTCCAGTTC GATCAACGGG ATGCTCTTCG TGCGTGGCAA TCGAGCCAAC
TACGACTCCT GGGCCGCGGA AGGCGCCACC GGATGGGACT ACCAGGGGGT GCTGCCGGCC
TTCAAGCGGC TGGAGAACTG GGAAGGCGGC GCGAACGACC TCCGCGGCAG CGGTGGCCCG
ATCGAGGTGA CCCGCCAGCG CGACCTCACC GAGGCCACGA CGTCGTACAT GGACGCGCTC
TCCGACACGC TCGACGCACC GAAGATCGAG GACTACAACG GCCCCTCTCA GGAGGGCGTG
AGCGTCTTTC AGGAGAGCGC CGCGAACGGT ACCCGGTACA GCTCGGCGCA GGGCTACCTC
CGCACCGCTC GCCCCAATCT CCGCGTGCAC GTGAACGCCC ACGTCAAGCG CGTGATCATC
GACAACGGTC GCGCCACGGG TGTCGAGGTC CTCGAAGGCA GGGGCGTGCA CACCATCCGC
GCCAACCGTG AGGTGATCGT CTCGGCCGGT GTGATCGGCA GCCCACAGAT CCTCATGCTC
TCGGGCGTCG GACCCGCGCC ACACTTGCGG GAGAAGGGAA TCGGCGTTCA GGCCGACCTG
CCTGTCGGCC AGAATCTCCA CGACCATCTG TTCGTCCCCA CTACCTTCCT GATGAGGGAT
GCCGTCAACA AGGGCACACC CGCCTACTTC GCCAAGGGAC TCGCCGCCGA GGTCCGCAGG
CCCGGTACCA CCTGGATGGC GCGTACCGTC TTCGACGCCG TCGGTTTCGT GCGCACCTCC
TTCGCCAAGG ACATCCCGGA CCTGCAGATC CACTGTCTCC CCTGGAACTA CCCGGTGCCC
AACCAGGATG CCGACAAACT GCACATGGTT GATCCGCGCC CGGGCCTGAC CATCCTGCCC
ACGCTGATCT ACCCGAAGAG CCGCGGCGAA CTGCGCCTGA ACTCGGCCGA CCCGTTGGAC
TCGCCGATGA TCGATCCCGC GTACCTCAGT GATCCGCAGG ACACCGAGGT GCTGATGGAG
GGCATCGGCA TGGTCCGCGA GGTGATGAAC CATCCGGCGG TCCGCGGCAA GGTGAGCGAG
GAGTTCACGC CGGGCGCGGC CCTGAAGGAC GATGCGGCGA TGCGACGCGA GCTACCCAAT
CGCGTGCATT CGGTGTACCA CCCGGTGGGC ACCTGCCGGA TGGGCACCGA CGAGCGCGCC
GTCGTCGACC CCGAGCTCCG CGTGATAGGC ATCGAAGGCC TGCGCGTGGC GGATGCGTCG
ATCATGCCGT CCATCACCGG AGGCAACACG AACGCGCCGT CGTACATGAT CGGTGAGATG
TGCGCACGGT TCTTGGGCGC CTGA
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| Protein sequence | MIRKLYKTAT VPVSDSETVD YIVVGSGSAG SVVAGRLADT GATVALLEAG PADNTRMTQV
PGMITMVHTV PQMKSRVAWK QYSVPQKFAN DRAIPMTRGK ILGGSSSING MLFVRGNRAN
YDSWAAEGAT GWDYQGVLPA FKRLENWEGG ANDLRGSGGP IEVTRQRDLT EATTSYMDAL
SDTLDAPKIE DYNGPSQEGV SVFQESAANG TRYSSAQGYL RTARPNLRVH VNAHVKRVII
DNGRATGVEV LEGRGVHTIR ANREVIVSAG VIGSPQILML SGVGPAPHLR EKGIGVQADL
PVGQNLHDHL FVPTTFLMRD AVNKGTPAYF AKGLAAEVRR PGTTWMARTV FDAVGFVRTS
FAKDIPDLQI HCLPWNYPVP NQDADKLHMV DPRPGLTILP TLIYPKSRGE LRLNSADPLD
SPMIDPAYLS DPQDTEVLME GIGMVREVMN HPAVRGKVSE EFTPGAALKD DAAMRRELPN
RVHSVYHPVG TCRMGTDERA VVDPELRVIG IEGLRVADAS IMPSITGGNT NAPSYMIGEM
CARFLGA
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